NKX3-1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NKX3-1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NKX3-1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NKX3-1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NKX3-1 Up.

Results found

Linked to

	Label	Description
	TMEM140 Gene (Entity type)	ENSG00000146859 - transmembrane protein 140
	SLIRP Gene (Entity type)	ENSG00000119705 - SRA stem-loop interacting RNA binding protein
	DUSP11 Gene (Entity type)	ENSG00000144048 - dual specificity phosphatase 11
	PPDPF Gene (Entity type)	ENSG00000125534 - pancreatic progenitor cell differentiation and proliferation factor
	IQSEC1 Gene (Entity type)	ENSG00000144711 - IQ motif and Sec7 domain ArfGEF 1
	VPS4B Gene (Entity type)	ENSG00000119541 - vacuolar protein sorting 4 homolog B
	AP2S1 Gene (Entity type)	ENSG00000042753 - adaptor related protein complex 2 subunit sigma 1
	NCDN Gene (Entity type)	ENSG00000020129 - neurochondrin
	TRIM21 Gene (Entity type)	ENSG00000132109 - tripartite motif containing 21
	FHIT Gene (Entity type)	ENSG00000189283 - fragile histidine triad diadenosine triphosphatase

TMEM140

Gene (Entity type)

ENSG00000146859 - transmembrane protein 140

SLIRP

Gene (Entity type)

ENSG00000119705 - SRA stem-loop interacting RNA binding protein

DUSP11

Gene (Entity type)

ENSG00000144048 - dual specificity phosphatase 11

PPDPF

Gene (Entity type)

ENSG00000125534 - pancreatic progenitor cell differentiation and proliferation factor

IQSEC1

Gene (Entity type)

ENSG00000144711 - IQ motif and Sec7 domain ArfGEF 1

VPS4B

Gene (Entity type)

ENSG00000119541 - vacuolar protein sorting 4 homolog B

AP2S1

Gene (Entity type)

ENSG00000042753 - adaptor related protein complex 2 subunit sigma 1

NCDN

Gene (Entity type)

ENSG00000020129 - neurochondrin

TRIM21

Gene (Entity type)

ENSG00000132109 - tripartite motif containing 21

FHIT

Gene (Entity type)

ENSG00000189283 - fragile histidine triad diadenosine triphosphatase

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.