GSE159678 hydroxychloroquine 6 v 2 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE159678_hydroxychloroquine_6_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE159678_hydroxychloroquine_6_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE159678_hydroxychloroquine_6_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE159678_hydroxychloroquine_6_v_2_human_dn.

Results found

Linked to

	Label	Description
	TDP1 Gene (Entity type)	ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1
	TANC2 Gene (Entity type)	ENSG00000170921 - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
	XPC Gene (Entity type)	ENSG00000154767 - XPC complex subunit, DNA damage recognition and repair factor
	DENND11 Gene (Entity type)	ENSG00000257093 - DENN domain containing 11
	MDC1 Gene (Entity type)	ENSG00000137337 - mediator of DNA damage checkpoint 1
	EEF2K Gene (Entity type)	ENSG00000103319 - eukaryotic elongation factor 2 kinase
	ICOSLG Gene (Entity type)	ENSG00000160223 - inducible T cell costimulator ligand
	SEMA6B Gene (Entity type)	ENSG00000167680 - semaphorin 6B
	CDK5RAP2 Gene (Entity type)	ENSG00000136861 - CDK5 regulatory subunit associated protein 2
	TULP3 Gene (Entity type)	ENSG00000078246 - TUB like protein 3

TDP1

Gene (Entity type)

ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1

TANC2

Gene (Entity type)

ENSG00000170921 - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2

XPC

Gene (Entity type)

ENSG00000154767 - XPC complex subunit, DNA damage recognition and repair factor

DENND11

Gene (Entity type)

ENSG00000257093 - DENN domain containing 11

MDC1

Gene (Entity type)

ENSG00000137337 - mediator of DNA damage checkpoint 1

EEF2K

Gene (Entity type)

ENSG00000103319 - eukaryotic elongation factor 2 kinase

ICOSLG

Gene (Entity type)

ENSG00000160223 - inducible T cell costimulator ligand

SEMA6B

Gene (Entity type)

ENSG00000167680 - semaphorin 6B

CDK5RAP2

Gene (Entity type)

ENSG00000136861 - CDK5 regulatory subunit associated protein 2

TULP3

Gene (Entity type)

ENSG00000078246 - TUB like protein 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.