GSE171692 FXN knockdown 1 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE171692_FXN knockdown_1_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE171692_FXN knockdown_1_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE171692_FXN knockdown_1_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE171692_FXN knockdown_1_v_0_human_dn.

Results found

Linked to

	Label	Description
	HDAC2 Gene (Entity type)	ENSG00000196591 - histone deacetylase 2
	PPP2R2C Gene (Entity type)	ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma
	CPNE3 Gene (Entity type)	ENSG00000085719 - copine 3
	NRAS Gene (Entity type)	ENSG00000213281 - NRAS proto-oncogene, GTPase
	AGL Gene (Entity type)	ENSG00000162688 - amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase
	CAT Gene (Entity type)	ENSG00000121691 - catalase
	EXT2 Gene (Entity type)	ENSG00000151348 - exostosin glycosyltransferase 2
	PLCG1 Gene (Entity type)	ENSG00000124181 - phospholipase C gamma 1
	MAPK9 Gene (Entity type)	ENSG00000050748 - mitogen-activated protein kinase 9
	MEGF9 Gene (Entity type)	ENSG00000106780 - multiple EGF like domains 9

HDAC2

Gene (Entity type)

ENSG00000196591 - histone deacetylase 2

PPP2R2C

Gene (Entity type)

ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma

CPNE3

Gene (Entity type)

ENSG00000085719 - copine 3

NRAS

Gene (Entity type)

ENSG00000213281 - NRAS proto-oncogene, GTPase

AGL

Gene (Entity type)

ENSG00000162688 - amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase

CAT

Gene (Entity type)

ENSG00000121691 - catalase

EXT2

Gene (Entity type)

ENSG00000151348 - exostosin glycosyltransferase 2

PLCG1

Gene (Entity type)

ENSG00000124181 - phospholipase C gamma 1

MAPK9

Gene (Entity type)

ENSG00000050748 - mitogen-activated protein kinase 9

MEGF9

Gene (Entity type)

ENSG00000106780 - multiple EGF like domains 9

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.