GSE57871 GLI1 PSMD13 knockdown HCT 116 Vorinostat 6 v 12 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_6_v_12_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_6_v_12_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_6_v_12_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_6_v_12_human_up.

Results found

Linked to

	Label	Description
	ASMTL Gene (Entity type)	acetylserotonin O-methyltransferase like
	GOLGA2P7 Gene (Entity type)	GOLGA2 pseudogene 7
	DUBR Gene (Entity type)	DPPA2 upstream binding RNA
	TRIM15 Gene (Entity type)	tripartite motif containing 15
	NKILA Gene (Entity type)	NF-kappaB interacting lncRNA
	GIHCG Gene (Entity type)	GIHCG inhibitor of miR-200b/200a/429 expression
	SMIM10L3 Gene (Entity type)	small integral membrane protein 10 like 3
	MGC12916 Gene (Entity type)	uncharacterized protein MGC12916
	SDAD1P1 Gene (Entity type)	SDA1 domain containing 1 pseudogene 1
	LINC00659 Gene (Entity type)	long intergenic non-protein coding RNA 659

ASMTL

Gene (Entity type)

acetylserotonin O-methyltransferase like

GOLGA2P7

Gene (Entity type)

GOLGA2 pseudogene 7

DUBR

Gene (Entity type)

DPPA2 upstream binding RNA

TRIM15

Gene (Entity type)

tripartite motif containing 15

NKILA

Gene (Entity type)

NF-kappaB interacting lncRNA

GIHCG

Gene (Entity type)

GIHCG inhibitor of miR-200b/200a/429 expression

SMIM10L3

Gene (Entity type)

small integral membrane protein 10 like 3

MGC12916

Gene (Entity type)

uncharacterized protein MGC12916

SDAD1P1

Gene (Entity type)

SDA1 domain containing 1 pseudogene 1

LINC00659

Gene (Entity type)

long intergenic non-protein coding RNA 659

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.