LIMK1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with LIMK1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with LIMK1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with LIMK1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with LIMK1 Up.

Results found

Linked to

	Label	Description
	PRCP Gene (Entity type)	ENSG00000137509 - prolylcarboxypeptidase
	NXT1 Gene (Entity type)	ENSG00000132661 - nuclear transport factor 2 like export factor 1
	MRPL57 Gene (Entity type)	ENSG00000173141 - mitochondrial ribosomal protein L57
	SIVA1 Gene (Entity type)	ENSG00000184990 - SIVA1 apoptosis inducing factor
	BATF3 Gene (Entity type)	ENSG00000123685 - basic leucine zipper ATF-like transcription factor 3
	UBXN7 Gene (Entity type)	ENSG00000163960 - UBX domain protein 7
	PRKACA Gene (Entity type)	ENSG00000072062 - protein kinase cAMP-activated catalytic subunit alpha
	RAB33A Gene (Entity type)	ENSG00000134594 - RAB33A, member RAS oncogene family
	LSM7 Gene (Entity type)	ENSG00000130332 - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
	DDX46 Gene (Entity type)	ENSG00000145833 - DEAD-box helicase 46

PRCP

Gene (Entity type)

ENSG00000137509 - prolylcarboxypeptidase

NXT1

Gene (Entity type)

ENSG00000132661 - nuclear transport factor 2 like export factor 1

MRPL57

Gene (Entity type)

ENSG00000173141 - mitochondrial ribosomal protein L57

SIVA1

Gene (Entity type)

ENSG00000184990 - SIVA1 apoptosis inducing factor

BATF3

Gene (Entity type)

ENSG00000123685 - basic leucine zipper ATF-like transcription factor 3

UBXN7

Gene (Entity type)

ENSG00000163960 - UBX domain protein 7

PRKACA

Gene (Entity type)

ENSG00000072062 - protein kinase cAMP-activated catalytic subunit alpha

RAB33A

Gene (Entity type)

ENSG00000134594 - RAB33A, member RAS oncogene family

LSM7

Gene (Entity type)

ENSG00000130332 - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated

DDX46

Gene (Entity type)

ENSG00000145833 - DEAD-box helicase 46

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.