SIGIRR Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SIGIRR Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SIGIRR Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SIGIRR Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SIGIRR Up.

Results found

Linked to

	Label	Description
	NARF Gene (Entity type)	ENSG00000141562 - nuclear prelamin A recognition factor
	MEP1A Gene (Entity type)	ENSG00000112818 - meprin A subunit alpha
	ALPK3 Gene (Entity type)	ENSG00000136383 - alpha kinase 3
	GPRASP1 Gene (Entity type)	ENSG00000198932 - G protein-coupled receptor associated sorting protein 1
	GCG Gene (Entity type)	ENSG00000115263 - glucagon
	MMP13 Gene (Entity type)	ENSG00000137745 - matrix metallopeptidase 13
	LIN28A Gene (Entity type)	ENSG00000131914 - lin-28 RNA binding posttranscriptional regulator A
	PDPN Gene (Entity type)	ENSG00000162493 - podoplanin
	CAMK1 Gene (Entity type)	ENSG00000134072 - calcium/calmodulin dependent protein kinase I
	CIDEC Gene (Entity type)	ENSG00000187288 - cell death inducing DFFA like effector c

NARF

Gene (Entity type)

ENSG00000141562 - nuclear prelamin A recognition factor

MEP1A

Gene (Entity type)

ENSG00000112818 - meprin A subunit alpha

ALPK3

Gene (Entity type)

ENSG00000136383 - alpha kinase 3

GPRASP1

Gene (Entity type)

ENSG00000198932 - G protein-coupled receptor associated sorting protein 1

GCG

Gene (Entity type)

ENSG00000115263 - glucagon

MMP13

Gene (Entity type)

ENSG00000137745 - matrix metallopeptidase 13

LIN28A

Gene (Entity type)

ENSG00000131914 - lin-28 RNA binding posttranscriptional regulator A

PDPN

Gene (Entity type)

ENSG00000162493 - podoplanin

CAMK1

Gene (Entity type)

ENSG00000134072 - calcium/calmodulin dependent protein kinase I

CIDEC

Gene (Entity type)

ENSG00000187288 - cell death inducing DFFA like effector c

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.