GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 6 v 9 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

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Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_9_human_up.

Results found

Linked to

	Label	Description
	CISH Gene (Entity type)	ENSG00000114737 - cytokine inducible SH2 containing protein
	S1PR3 Gene (Entity type)	ENSG00000213694 - sphingosine-1-phosphate receptor 3
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	THRA Gene (Entity type)	ENSG00000126351 - thyroid hormone receptor alpha
	UBTF Gene (Entity type)	ENSG00000108312 - upstream binding transcription factor
	PRKAR2A Gene (Entity type)	ENSG00000114302 - protein kinase cAMP-dependent type II regulatory subunit alpha
	NFIC Gene (Entity type)	ENSG00000141905 - nuclear factor I C
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47
	DNAJC5 Gene (Entity type)	ENSG00000101152 - DnaJ heat shock protein family (Hsp40) member C5
	AGPAT3 Gene (Entity type)	ENSG00000160216 - 1-acylglycerol-3-phosphate O-acyltransferase 3

CISH

Gene (Entity type)

ENSG00000114737 - cytokine inducible SH2 containing protein

S1PR3

Gene (Entity type)

ENSG00000213694 - sphingosine-1-phosphate receptor 3

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

THRA

Gene (Entity type)

ENSG00000126351 - thyroid hormone receptor alpha

UBTF

Gene (Entity type)

ENSG00000108312 - upstream binding transcription factor

PRKAR2A

Gene (Entity type)

ENSG00000114302 - protein kinase cAMP-dependent type II regulatory subunit alpha

NFIC

Gene (Entity type)

ENSG00000141905 - nuclear factor I C

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

DNAJC5

Gene (Entity type)

ENSG00000101152 - DnaJ heat shock protein family (Hsp40) member C5

AGPAT3

Gene (Entity type)

ENSG00000160216 - 1-acylglycerol-3-phosphate O-acyltransferase 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.