BCKDK Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with BCKDK Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with BCKDK Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with BCKDK Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with BCKDK Up.

Results found

Linked to

	Label	Description
	ZNF706 Gene (Entity type)	ENSG00000120963 - zinc finger protein 706
	TM4SF20 Gene (Entity type)	ENSG00000168955 - transmembrane 4 L six family member 20
	HS3ST3A1 Gene (Entity type)	ENSG00000153976 - heparan sulfate-glucosamine 3-sulfotransferase 3A1
	YAF2 Gene (Entity type)	ENSG00000015153 - YY1 associated factor 2
	CLDN18 Gene (Entity type)	ENSG00000066405 - claudin 18
	IL1RL1 Gene (Entity type)	ENSG00000115602 - interleukin 1 receptor like 1
	FAM222B Gene (Entity type)	ENSG00000173065 - family with sequence similarity 222 member B
	RPL36AL Gene (Entity type)	ENSG00000165502 - ribosomal protein L36a like
	WBP4 Gene (Entity type)	ENSG00000120688 - WW domain binding protein 4
	NSA2 Gene (Entity type)	ENSG00000164346 - NSA2 ribosome biogenesis factor

ZNF706

Gene (Entity type)

ENSG00000120963 - zinc finger protein 706

TM4SF20

Gene (Entity type)

ENSG00000168955 - transmembrane 4 L six family member 20

HS3ST3A1

Gene (Entity type)

ENSG00000153976 - heparan sulfate-glucosamine 3-sulfotransferase 3A1

YAF2

Gene (Entity type)

ENSG00000015153 - YY1 associated factor 2

CLDN18

Gene (Entity type)

ENSG00000066405 - claudin 18

IL1RL1

Gene (Entity type)

ENSG00000115602 - interleukin 1 receptor like 1

FAM222B

Gene (Entity type)

ENSG00000173065 - family with sequence similarity 222 member B

RPL36AL

Gene (Entity type)

ENSG00000165502 - ribosomal protein L36a like

WBP4

Gene (Entity type)

ENSG00000120688 - WW domain binding protein 4

NSA2

Gene (Entity type)

ENSG00000164346 - NSA2 ribosome biogenesis factor

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.