GSE157109 TRIM8 knockdown MCF-7 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE157109_TRIM8 knockdown_MCF-7_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE157109_TRIM8 knockdown_MCF-7_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE157109_TRIM8 knockdown_MCF-7_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE157109_TRIM8 knockdown_MCF-7_0_v_1_human_up.

Results found

Linked to

	Label	Description
	VARS1 Gene (Entity type)	valyl-tRNA synthetase 1
	H19 Gene (Entity type)	H19 imprinted maternally expressed transcript
	SNHG1 Gene (Entity type)	small nucleolar RNA host gene 1
	SNHG5 Gene (Entity type)	small nucleolar RNA host gene 5
	THAP9-AS1 Gene (Entity type)	THAP9 antisense RNA 1
	SNHG3 Gene (Entity type)	small nucleolar RNA host gene 3
	CROCCP2 Gene (Entity type)	CROCC pseudogene 2
	SNHG17 Gene (Entity type)	small nucleolar RNA host gene 17
	SNHG12 Gene (Entity type)	small nucleolar RNA host gene 12
	CENPBD2P Gene (Entity type)	CENPB DNA-binding domains containing 2, pseudogene

VARS1

Gene (Entity type)

valyl-tRNA synthetase 1

H19

Gene (Entity type)

H19 imprinted maternally expressed transcript

SNHG1

Gene (Entity type)

small nucleolar RNA host gene 1

SNHG5

Gene (Entity type)

small nucleolar RNA host gene 5

THAP9-AS1

Gene (Entity type)

THAP9 antisense RNA 1

SNHG3

Gene (Entity type)

small nucleolar RNA host gene 3

CROCCP2

Gene (Entity type)

CROCC pseudogene 2

SNHG17

Gene (Entity type)

small nucleolar RNA host gene 17

SNHG12

Gene (Entity type)

small nucleolar RNA host gene 12

CENPBD2P

Gene (Entity type)

CENPB DNA-binding domains containing 2, pseudogene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.