GSE188728 GSE188730 BRG1 HSA BCL7 knockdown B cell 3 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE188728_GSE188730_BRG1_HSA_BCL7 knockdown_B cell_3_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE188728_GSE188730_BRG1_HSA_BCL7 knockdown_B cell_3_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE188728_GSE188730_BRG1_HSA_BCL7 knockdown_B cell_3_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE188728_GSE188730_BRG1_HSA_BCL7 knockdown_B cell_3_v_1_human_dn.

Results found

Linked to

	Label	Description
	HDAC2 Gene (Entity type)	ENSG00000196591 - histone deacetylase 2
	RPS6 Gene (Entity type)	ENSG00000137154 - ribosomal protein S6
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	PPIA Gene (Entity type)	ENSG00000196262 - peptidylprolyl isomerase A
	PJA1 Gene (Entity type)	ENSG00000181191 - praja ring finger ubiquitin ligase 1
	PSMB2 Gene (Entity type)	ENSG00000126067 - proteasome 20S subunit beta 2
	ERN1 Gene (Entity type)	ENSG00000178607 - endoplasmic reticulum to nucleus signaling 1
	NRG1 Gene (Entity type)	ENSG00000157168 - neuregulin 1
	MAP2K3 Gene (Entity type)	ENSG00000034152 - mitogen-activated protein kinase kinase 3
	DYNLL2 Gene (Entity type)	ENSG00000264364 - dynein light chain LC8-type 2

HDAC2

Gene (Entity type)

ENSG00000196591 - histone deacetylase 2

RPS6

Gene (Entity type)

ENSG00000137154 - ribosomal protein S6

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

PPIA

Gene (Entity type)

ENSG00000196262 - peptidylprolyl isomerase A

PJA1

Gene (Entity type)

ENSG00000181191 - praja ring finger ubiquitin ligase 1

PSMB2

Gene (Entity type)

ENSG00000126067 - proteasome 20S subunit beta 2

ERN1

Gene (Entity type)

ENSG00000178607 - endoplasmic reticulum to nucleus signaling 1

NRG1

Gene (Entity type)

ENSG00000157168 - neuregulin 1

MAP2K3

Gene (Entity type)

ENSG00000034152 - mitogen-activated protein kinase kinase 3

DYNLL2

Gene (Entity type)

ENSG00000264364 - dynein light chain LC8-type 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.