CD1C Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CD1C Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CD1C Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CD1C Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CD1C Up.

Results found

Linked to

	Label	Description
	SMAD4 Gene (Entity type)	ENSG00000141646 - SMAD family member 4
	SLC35A3 Gene (Entity type)	ENSG00000117620 - solute carrier family 35 member A3
	MED1 Gene (Entity type)	ENSG00000125686 - mediator complex subunit 1
	ATP8B4 Gene (Entity type)	ENSG00000104043 - ATPase phospholipid transporting 8B4 (putative)
	JAK2 Gene (Entity type)	ENSG00000096968 - Janus kinase 2
	DCTN4 Gene (Entity type)	ENSG00000132912 - dynactin subunit 4
	CFAP20 Gene (Entity type)	ENSG00000070761 - cilia and flagella associated protein 20
	ATG5 Gene (Entity type)	ENSG00000057663 - autophagy related 5
	CTNNA2 Gene (Entity type)	ENSG00000066032 - catenin alpha 2
	STATH Gene (Entity type)	ENSG00000126549 - statherin

SMAD4

Gene (Entity type)

ENSG00000141646 - SMAD family member 4

SLC35A3

Gene (Entity type)

ENSG00000117620 - solute carrier family 35 member A3

MED1

Gene (Entity type)

ENSG00000125686 - mediator complex subunit 1

ATP8B4

Gene (Entity type)

ENSG00000104043 - ATPase phospholipid transporting 8B4 (putative)

JAK2

Gene (Entity type)

ENSG00000096968 - Janus kinase 2

DCTN4

Gene (Entity type)

ENSG00000132912 - dynactin subunit 4

CFAP20

Gene (Entity type)

ENSG00000070761 - cilia and flagella associated protein 20

ATG5

Gene (Entity type)

ENSG00000057663 - autophagy related 5

CTNNA2

Gene (Entity type)

ENSG00000066032 - catenin alpha 2

STATH

Gene (Entity type)

ENSG00000126549 - statherin

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.