TGFB3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TGFB3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TGFB3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TGFB3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TGFB3 Up.

Results found

Linked to

	Label	Description
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	NOX1 Gene (Entity type)	ENSG00000007952 - NADPH oxidase 1
	ELP5 Gene (Entity type)	ENSG00000170291 - elongator acetyltransferase complex subunit 5
	DYNC1I1 Gene (Entity type)	ENSG00000158560 - dynein cytoplasmic 1 intermediate chain 1
	VKORC1 Gene (Entity type)	ENSG00000167397 - vitamin K epoxide reductase complex subunit 1
	SV2B Gene (Entity type)	ENSG00000185518 - synaptic vesicle glycoprotein 2B
	NDUFB8 Gene (Entity type)	ENSG00000166136 - NADH:ubiquinone oxidoreductase subunit B8
	COPZ2 Gene (Entity type)	ENSG00000005243 - coat protein complex I subunit zeta 2
	TYR Gene (Entity type)	ENSG00000077498 - tyrosinase
	SEM1 Gene (Entity type)	ENSG00000127922 - SEM1 26S proteasome subunit

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

NOX1

Gene (Entity type)

ENSG00000007952 - NADPH oxidase 1

ELP5

Gene (Entity type)

ENSG00000170291 - elongator acetyltransferase complex subunit 5

DYNC1I1

Gene (Entity type)

ENSG00000158560 - dynein cytoplasmic 1 intermediate chain 1

VKORC1

Gene (Entity type)

ENSG00000167397 - vitamin K epoxide reductase complex subunit 1

SV2B

Gene (Entity type)

ENSG00000185518 - synaptic vesicle glycoprotein 2B

NDUFB8

Gene (Entity type)

ENSG00000166136 - NADH:ubiquinone oxidoreductase subunit B8

COPZ2

Gene (Entity type)

ENSG00000005243 - coat protein complex I subunit zeta 2

TYR

Gene (Entity type)

ENSG00000077498 - tyrosinase

SEM1

Gene (Entity type)

ENSG00000127922 - SEM1 26S proteasome subunit

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.