CTSG Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CTSG Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CTSG Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CTSG Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CTSG Up.

Results found

Linked to

	Label	Description
	CCNC Gene (Entity type)	ENSG00000112237 - cyclin C
	PPM1B Gene (Entity type)	ENSG00000138032 - protein phosphatase, Mg2+/Mn2+ dependent 1B
	SLIRP Gene (Entity type)	ENSG00000119705 - SRA stem-loop interacting RNA binding protein
	SF3A2 Gene (Entity type)	ENSG00000104897 - splicing factor 3a subunit 2
	AGA Gene (Entity type)	ENSG00000038002 - aspartylglucosaminidase
	PPDPF Gene (Entity type)	ENSG00000125534 - pancreatic progenitor cell differentiation and proliferation factor
	TRAPPC4 Gene (Entity type)	ENSG00000196655 - trafficking protein particle complex subunit 4
	CITED1 Gene (Entity type)	ENSG00000125931 - Cbp/p300 interacting transactivator with ED-rich tail 1
	COX17 Gene (Entity type)	ENSG00000138495 - cytochrome c oxidase copper chaperone COX17
	HAUS3 Gene (Entity type)	ENSG00000214367 - HAUS augmin like complex subunit 3

CCNC

Gene (Entity type)

ENSG00000112237 - cyclin C

PPM1B

Gene (Entity type)

ENSG00000138032 - protein phosphatase, Mg2+/Mn2+ dependent 1B

SLIRP

Gene (Entity type)

ENSG00000119705 - SRA stem-loop interacting RNA binding protein

SF3A2

Gene (Entity type)

ENSG00000104897 - splicing factor 3a subunit 2

AGA

Gene (Entity type)

ENSG00000038002 - aspartylglucosaminidase

PPDPF

Gene (Entity type)

ENSG00000125534 - pancreatic progenitor cell differentiation and proliferation factor

TRAPPC4

Gene (Entity type)

ENSG00000196655 - trafficking protein particle complex subunit 4

CITED1

Gene (Entity type)

ENSG00000125931 - Cbp/p300 interacting transactivator with ED-rich tail 1

COX17

Gene (Entity type)

ENSG00000138495 - cytochrome c oxidase copper chaperone COX17

HAUS3

Gene (Entity type)

ENSG00000214367 - HAUS augmin like complex subunit 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.