ME3 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ME3 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ME3 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ME3 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ME3 Down.

Results found

Linked to

	Label	Description
	CRNN Gene (Entity type)	ENSG00000143536 - cornulin
	BUD31 Gene (Entity type)	ENSG00000106245 - BUD31 spliceosome associated protein
	PNOC Gene (Entity type)	ENSG00000168081 - prepronociceptin
	PTPN7 Gene (Entity type)	ENSG00000143851 - protein tyrosine phosphatase non-receptor type 7
	TGM1 Gene (Entity type)	ENSG00000092295 - transglutaminase 1
	COA3 Gene (Entity type)	ENSG00000183978 - cytochrome c oxidase assembly factor 3
	TGM3 Gene (Entity type)	ENSG00000125780 - transglutaminase 3
	EPS8L1 Gene (Entity type)	ENSG00000131037 - EPS8 signaling adaptor L1
	TNFSF9 Gene (Entity type)	ENSG00000125657 - TNF superfamily member 9
	CIDEC Gene (Entity type)	ENSG00000187288 - cell death inducing DFFA like effector c

CRNN

Gene (Entity type)

ENSG00000143536 - cornulin

BUD31

Gene (Entity type)

ENSG00000106245 - BUD31 spliceosome associated protein

PNOC

Gene (Entity type)

ENSG00000168081 - prepronociceptin

PTPN7

Gene (Entity type)

ENSG00000143851 - protein tyrosine phosphatase non-receptor type 7

TGM1

Gene (Entity type)

ENSG00000092295 - transglutaminase 1

COA3

Gene (Entity type)

ENSG00000183978 - cytochrome c oxidase assembly factor 3

TGM3

Gene (Entity type)

ENSG00000125780 - transglutaminase 3

EPS8L1

Gene (Entity type)

ENSG00000131037 - EPS8 signaling adaptor L1

TNFSF9

Gene (Entity type)

ENSG00000125657 - TNF superfamily member 9

CIDEC

Gene (Entity type)

ENSG00000187288 - cell death inducing DFFA like effector c

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Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.