GSE125956 SYK knockdown 4 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE125956_SYK knockdown_4_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE125956_SYK knockdown_4_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE125956_SYK knockdown_4_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE125956_SYK knockdown_4_v_2_human_up.

Results found

Linked to

	Label	Description
	MIR4435-2HG Gene (Entity type)	ENSG00000172965 - MIR4435-2 host gene
	MSL3B Gene (Entity type)	ENSG00000293137 - MSL complex subunit 3B
	NORAD Gene (Entity type)	ENSG00000260032 - non-coding RNA activated by DNA damage
	LINC01291 Gene (Entity type)	ENSG00000204792 - long intergenic non-protein coding RNA 1291
	NBPF26 Gene (Entity type)	ENSG00000273136 - NBPF member 26
	SBDSP1 Gene (Entity type)	ENSG00000291152 - SBDS pseudogene 1
	FRG1CP Gene (Entity type)	ENSG00000282826 - FSHD region gene 1 family member C, pseudogene
	HERPUD2-AS1 Gene (Entity type)	ENSG00000271122 - HERPUD2 antisense RNA 1
	CD27-AS1 Gene (Entity type)	ENSG00000215039 - CD27 antisense RNA 1
	LINC00973 Gene (Entity type)	ENSG00000240476 - long intergenic non-protein coding RNA 973

MIR4435-2HG

Gene (Entity type)

ENSG00000172965 - MIR4435-2 host gene

MSL3B

Gene (Entity type)

ENSG00000293137 - MSL complex subunit 3B

NORAD

Gene (Entity type)

ENSG00000260032 - non-coding RNA activated by DNA damage

LINC01291

Gene (Entity type)

ENSG00000204792 - long intergenic non-protein coding RNA 1291

NBPF26

Gene (Entity type)

ENSG00000273136 - NBPF member 26

SBDSP1

Gene (Entity type)

ENSG00000291152 - SBDS pseudogene 1

FRG1CP

Gene (Entity type)

ENSG00000282826 - FSHD region gene 1 family member C, pseudogene

HERPUD2-AS1

Gene (Entity type)

ENSG00000271122 - HERPUD2 antisense RNA 1

CD27-AS1

Gene (Entity type)

ENSG00000215039 - CD27 antisense RNA 1

LINC00973

Gene (Entity type)

ENSG00000240476 - long intergenic non-protein coding RNA 973

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.