CRIP2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CRIP2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CRIP2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CRIP2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CRIP2 Up.

Results found

Linked to

	Label	Description
	FBXL7 Gene (Entity type)	ENSG00000183580 - F-box and leucine rich repeat protein 7
	STK25 Gene (Entity type)	ENSG00000115694 - serine/threonine kinase 25
	PRP4K Gene (Entity type)	ENSG00000112739 - pre-mRNA processing factor kinase PRP4K
	TM4SF20 Gene (Entity type)	ENSG00000168955 - transmembrane 4 L six family member 20
	UPF3B Gene (Entity type)	ENSG00000125351 - UPF3B regulator of nonsense mediated mRNA decay
	NAA40 Gene (Entity type)	ENSG00000110583 - N-alpha-acetyltransferase 40, NatD catalytic subunit
	PRPF3 Gene (Entity type)	ENSG00000117360 - pre-mRNA processing factor 3
	GTF3C1 Gene (Entity type)	ENSG00000077235 - general transcription factor IIIC subunit 1
	TRPA1 Gene (Entity type)	ENSG00000104321 - transient receptor potential cation channel subfamily A member 1
	OTUD3 Gene (Entity type)	ENSG00000169914 - OTU deubiquitinase 3

FBXL7

Gene (Entity type)

ENSG00000183580 - F-box and leucine rich repeat protein 7

STK25

Gene (Entity type)

ENSG00000115694 - serine/threonine kinase 25

PRP4K

Gene (Entity type)

ENSG00000112739 - pre-mRNA processing factor kinase PRP4K

TM4SF20

Gene (Entity type)

ENSG00000168955 - transmembrane 4 L six family member 20

UPF3B

Gene (Entity type)

ENSG00000125351 - UPF3B regulator of nonsense mediated mRNA decay

NAA40

Gene (Entity type)

ENSG00000110583 - N-alpha-acetyltransferase 40, NatD catalytic subunit

PRPF3

Gene (Entity type)

ENSG00000117360 - pre-mRNA processing factor 3

GTF3C1

Gene (Entity type)

ENSG00000077235 - general transcription factor IIIC subunit 1

TRPA1

Gene (Entity type)

ENSG00000104321 - transient receptor potential cation channel subfamily A member 1

OTUD3

Gene (Entity type)

ENSG00000169914 - OTU deubiquitinase 3

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.