PIGA Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PIGA Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PIGA Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PIGA Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PIGA Up.

Results found

Linked to

	Label	Description
	EIF4E Gene (Entity type)	ENSG00000151247 - eukaryotic translation initiation factor 4E
	BMPR1A Gene (Entity type)	ENSG00000107779 - bone morphogenetic protein receptor type 1A
	SPCS3 Gene (Entity type)	ENSG00000129128 - signal peptidase complex subunit 3
	RBM8A Gene (Entity type)	ENSG00000265241 - RNA binding motif protein 8A
	EXOSC8 Gene (Entity type)	ENSG00000120699 - exosome component 8
	FBXW2 Gene (Entity type)	ENSG00000119402 - F-box and WD repeat domain containing 2
	YEATS4 Gene (Entity type)	ENSG00000127337 - YEATS domain containing 4
	PRELID3B Gene (Entity type)	ENSG00000101166 - PRELI domain containing 3B
	PDK1 Gene (Entity type)	ENSG00000152256 - pyruvate dehydrogenase kinase 1
	MPHOSPH9 Gene (Entity type)	ENSG00000051825 - M-phase phosphoprotein 9

EIF4E

Gene (Entity type)

ENSG00000151247 - eukaryotic translation initiation factor 4E

BMPR1A

Gene (Entity type)

ENSG00000107779 - bone morphogenetic protein receptor type 1A

SPCS3

Gene (Entity type)

ENSG00000129128 - signal peptidase complex subunit 3

RBM8A

Gene (Entity type)

ENSG00000265241 - RNA binding motif protein 8A

EXOSC8

Gene (Entity type)

ENSG00000120699 - exosome component 8

FBXW2

Gene (Entity type)

ENSG00000119402 - F-box and WD repeat domain containing 2

YEATS4

Gene (Entity type)

ENSG00000127337 - YEATS domain containing 4

PRELID3B

Gene (Entity type)

ENSG00000101166 - PRELI domain containing 3B

PDK1

Gene (Entity type)

ENSG00000152256 - pyruvate dehydrogenase kinase 1

MPHOSPH9

Gene (Entity type)

ENSG00000051825 - M-phase phosphoprotein 9

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.