GSE183893 EP300 PORCN RNF43 knockout HPAF-II 3 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE183893_EP300_PORCN_RNF43 knockout_HPAF-II_3_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE183893_EP300_PORCN_RNF43 knockout_HPAF-II_3_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE183893_EP300_PORCN_RNF43 knockout_HPAF-II_3_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE183893_EP300_PORCN_RNF43 knockout_HPAF-II_3_v_0_human_dn.

Results found

Linked to

	Label	Description
	PTPN12 Gene (Entity type)	ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	B4GALT4 Gene (Entity type)	ENSG00000121578 - beta-1,4-galactosyltransferase 4
	NSA2 Gene (Entity type)	ENSG00000164346 - NSA2 ribosome biogenesis factor
	SLC7A6 Gene (Entity type)	ENSG00000103064 - solute carrier family 7 member 6
	BRIX1 Gene (Entity type)	ENSG00000113460 - biogenesis of ribosomes BRX1
	RAB1A Gene (Entity type)	ENSG00000138069 - RAB1A, member RAS oncogene family
	NCEH1 Gene (Entity type)	ENSG00000144959 - neutral cholesterol ester hydrolase 1
	CALM2 Gene (Entity type)	ENSG00000143933 - calmodulin 2
	KIF21A Gene (Entity type)	ENSG00000139116 - kinesin family member 21A

PTPN12

Gene (Entity type)

ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

B4GALT4

Gene (Entity type)

ENSG00000121578 - beta-1,4-galactosyltransferase 4

NSA2

Gene (Entity type)

ENSG00000164346 - NSA2 ribosome biogenesis factor

SLC7A6

Gene (Entity type)

ENSG00000103064 - solute carrier family 7 member 6

BRIX1

Gene (Entity type)

ENSG00000113460 - biogenesis of ribosomes BRX1

RAB1A

Gene (Entity type)

ENSG00000138069 - RAB1A, member RAS oncogene family

NCEH1

Gene (Entity type)

ENSG00000144959 - neutral cholesterol ester hydrolase 1

CALM2

Gene (Entity type)

ENSG00000143933 - calmodulin 2

KIF21A

Gene (Entity type)

ENSG00000139116 - kinesin family member 21A

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.