PAICS Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PAICS Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PAICS Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PAICS Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PAICS Down.

Results found

Linked to

	Label	Description
	CACNA1A Gene (Entity type)	ENSG00000141837 - calcium voltage-gated channel subunit alpha1 A
	STX16 Gene (Entity type)	ENSG00000124222 - syntaxin 16
	PCGF3 Gene (Entity type)	ENSG00000185619 - polycomb group ring finger 3
	ELOB Gene (Entity type)	ENSG00000103363 - elongin B
	UBE2D3 Gene (Entity type)	ENSG00000109332 - ubiquitin conjugating enzyme E2 D3
	CTNND2 Gene (Entity type)	ENSG00000169862 - catenin delta 2
	PWP2 Gene (Entity type)	ENSG00000241945 - PWP2 small subunit processome component
	USO1 Gene (Entity type)	ENSG00000138768 - USO1 vesicle transport factor
	NAXD Gene (Entity type)	ENSG00000213995 - NAD(P)HX dehydratase
	PTPN2 Gene (Entity type)	ENSG00000175354 - protein tyrosine phosphatase non-receptor type 2

CACNA1A

Gene (Entity type)

ENSG00000141837 - calcium voltage-gated channel subunit alpha1 A

STX16

Gene (Entity type)

ENSG00000124222 - syntaxin 16

PCGF3

Gene (Entity type)

ENSG00000185619 - polycomb group ring finger 3

ELOB

Gene (Entity type)

ENSG00000103363 - elongin B

UBE2D3

Gene (Entity type)

ENSG00000109332 - ubiquitin conjugating enzyme E2 D3

CTNND2

Gene (Entity type)

ENSG00000169862 - catenin delta 2

PWP2

Gene (Entity type)

ENSG00000241945 - PWP2 small subunit processome component

USO1

Gene (Entity type)

ENSG00000138768 - USO1 vesicle transport factor

NAXD

Gene (Entity type)

ENSG00000213995 - NAD(P)HX dehydratase

PTPN2

Gene (Entity type)

ENSG00000175354 - protein tyrosine phosphatase non-receptor type 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.