CKM Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CKM Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CKM Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CKM Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CKM Up.

Results found

Linked to

	Label	Description
	NOSIP Gene (Entity type)	ENSG00000142546 - nitric oxide synthase interacting protein
	RARA Gene (Entity type)	ENSG00000131759 - retinoic acid receptor alpha
	VPS4B Gene (Entity type)	ENSG00000119541 - vacuolar protein sorting 4 homolog B
	DRAP1 Gene (Entity type)	ENSG00000175550 - DR1 associated protein 1
	RPL26L1 Gene (Entity type)	ENSG00000037241 - ribosomal protein L26 like 1
	IFNAR2 Gene (Entity type)	ENSG00000159110 - interferon alpha and beta receptor subunit 2
	SOD3 Gene (Entity type)	ENSG00000109610 - superoxide dismutase 3
	UQCRQ Gene (Entity type)	ENSG00000164405 - ubiquinol-cytochrome c reductase complex III subunit VII
	CCNH Gene (Entity type)	ENSG00000134480 - cyclin H
	MRPL33 Gene (Entity type)	ENSG00000243147 - mitochondrial ribosomal protein L33

NOSIP

Gene (Entity type)

ENSG00000142546 - nitric oxide synthase interacting protein

RARA

Gene (Entity type)

ENSG00000131759 - retinoic acid receptor alpha

VPS4B

Gene (Entity type)

ENSG00000119541 - vacuolar protein sorting 4 homolog B

DRAP1

Gene (Entity type)

ENSG00000175550 - DR1 associated protein 1

RPL26L1

Gene (Entity type)

ENSG00000037241 - ribosomal protein L26 like 1

IFNAR2

Gene (Entity type)

ENSG00000159110 - interferon alpha and beta receptor subunit 2

SOD3

Gene (Entity type)

ENSG00000109610 - superoxide dismutase 3

UQCRQ

Gene (Entity type)

ENSG00000164405 - ubiquinol-cytochrome c reductase complex III subunit VII

CCNH

Gene (Entity type)

ENSG00000134480 - cyclin H

MRPL33

Gene (Entity type)

ENSG00000243147 - mitochondrial ribosomal protein L33

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.