GSE133927 PTEN p53 Meox1 knockdown BT-549 RNA Small Interfering 1 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_0_human_dn.

Results found

Linked to

	Label	Description
	ARHGAP23 Gene (Entity type)	ENSG00000275832 - Rho GTPase activating protein 23
	HCP5 Gene (Entity type)	ENSG00000206337 - HLA complex P5
	VAMP7 Gene (Entity type)	ENSG00000292366 - vesicle associated membrane protein 7
	LINC00205 Gene (Entity type)	ENSG00000223768 - long intergenic non-protein coding RNA 205
	NORAD Gene (Entity type)	ENSG00000260032 - non-coding RNA activated by DNA damage
	DUXAP8 Gene (Entity type)	ENSG00000206195 - double homeobox A pseudogene 8
	TP53TG1 Gene (Entity type)	ENSG00000182165 - TP53 target 1
	LINC03040 Gene (Entity type)	ENSG00000181577 - long intergenic non-protein coding RNA 3040
	SBDSP1 Gene (Entity type)	ENSG00000291152 - SBDS pseudogene 1
	LINC00667 Gene (Entity type)	ENSG00000263753 - long intergenic non-protein coding RNA 667

ARHGAP23

Gene (Entity type)

ENSG00000275832 - Rho GTPase activating protein 23

HCP5

Gene (Entity type)

ENSG00000206337 - HLA complex P5

VAMP7

Gene (Entity type)

ENSG00000292366 - vesicle associated membrane protein 7

LINC00205

Gene (Entity type)

ENSG00000223768 - long intergenic non-protein coding RNA 205

NORAD

Gene (Entity type)

ENSG00000260032 - non-coding RNA activated by DNA damage

DUXAP8

Gene (Entity type)

ENSG00000206195 - double homeobox A pseudogene 8

TP53TG1

Gene (Entity type)

ENSG00000182165 - TP53 target 1

LINC03040

Gene (Entity type)

ENSG00000181577 - long intergenic non-protein coding RNA 3040

SBDSP1

Gene (Entity type)

ENSG00000291152 - SBDS pseudogene 1

LINC00667

Gene (Entity type)

ENSG00000263753 - long intergenic non-protein coding RNA 667

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.