GSE122979 GSE122980 LCL-161 MCF-7 2 v 3 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE122979_GSE122980_LCL-161_MCF-7_2_v_3_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE122979_GSE122980_LCL-161_MCF-7_2_v_3_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE122979_GSE122980_LCL-161_MCF-7_2_v_3_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE122979_GSE122980_LCL-161_MCF-7_2_v_3_human_dn.

Results found

Linked to

	Label	Description
	LINC01116 Gene (Entity type)	long intergenic non-protein coding RNA 1116
	SLC12A2-DT Gene (Entity type)	SLC12A2 divergent transcript
	ZFHX3-AS1 Gene (Entity type)	ZFHX3 antisense RNA 1
	NINJ2-AS1 Gene (Entity type)	NINJ2 antisense RNA 1
	ZNF710-AS1 Gene (Entity type)	ZNF710 antisense RNA 1
	PMS2P1 Gene (Entity type)	PMS1 homolog 2, mismatch repair system component pseudogene 1
	PTPRG-AS1 Gene (Entity type)	PTPRG antisense RNA 1
	TPTEP2-CSNK1E Gene (Entity type)	TPTEP2-CSNK1E readthrough
	FAM225B Gene (Entity type)	family with sequence similarity 225 member B
	LOC124906712 Gene (Entity type)	translation initiation factor IF-2

LINC01116

Gene (Entity type)

long intergenic non-protein coding RNA 1116

SLC12A2-DT

Gene (Entity type)

SLC12A2 divergent transcript

ZFHX3-AS1

Gene (Entity type)

ZFHX3 antisense RNA 1

NINJ2-AS1

Gene (Entity type)

NINJ2 antisense RNA 1

ZNF710-AS1

Gene (Entity type)

ZNF710 antisense RNA 1

PMS2P1

Gene (Entity type)

PMS1 homolog 2, mismatch repair system component pseudogene 1

PTPRG-AS1

Gene (Entity type)

PTPRG antisense RNA 1

TPTEP2-CSNK1E

Gene (Entity type)

TPTEP2-CSNK1E readthrough

FAM225B

Gene (Entity type)

family with sequence similarity 225 member B

LOC124906712

Gene (Entity type)

translation initiation factor IF-2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.