CKB Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CKB Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CKB Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CKB Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CKB Down.

Results found

Linked to

	Label	Description
	ASPA Gene (Entity type)	ENSG00000108381 - aspartoacylase
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47
	PIK3C2A Gene (Entity type)	ENSG00000011405 - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
	NCSTN Gene (Entity type)	ENSG00000162736 - nicastrin
	MAPK8IP3 Gene (Entity type)	ENSG00000138834 - mitogen-activated protein kinase 8 interacting protein 3
	MT3 Gene (Entity type)	ENSG00000087250 - metallothionein 3
	RNF115 Gene (Entity type)	ENSG00000265491 - ring finger protein 115
	ATP6V0C Gene (Entity type)	ENSG00000185883 - ATPase H+ transporting V0 subunit c
	TYR Gene (Entity type)	ENSG00000077498 - tyrosinase
	PLEKHF1 Gene (Entity type)	ENSG00000166289 - pleckstrin homology and FYVE domain containing 1

ASPA

Gene (Entity type)

ENSG00000108381 - aspartoacylase

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

PIK3C2A

Gene (Entity type)

ENSG00000011405 - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha

NCSTN

Gene (Entity type)

ENSG00000162736 - nicastrin

MAPK8IP3

Gene (Entity type)

ENSG00000138834 - mitogen-activated protein kinase 8 interacting protein 3

MT3

Gene (Entity type)

ENSG00000087250 - metallothionein 3

RNF115

Gene (Entity type)

ENSG00000265491 - ring finger protein 115

ATP6V0C

Gene (Entity type)

ENSG00000185883 - ATPase H+ transporting V0 subunit c

TYR

Gene (Entity type)

ENSG00000077498 - tyrosinase

PLEKHF1

Gene (Entity type)

ENSG00000166289 - pleckstrin homology and FYVE domain containing 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.