GNPTAB Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GNPTAB Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GNPTAB Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GNPTAB Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GNPTAB Down.

Results found

Linked to

	Label	Description
	GALE Gene (Entity type)	ENSG00000117308 - UDP-galactose-4-epimerase
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	ULK1 Gene (Entity type)	ENSG00000177169 - unc-51 like autophagy activating kinase 1
	NFIC Gene (Entity type)	ENSG00000141905 - nuclear factor I C
	RARA Gene (Entity type)	ENSG00000131759 - retinoic acid receptor alpha
	DICER1 Gene (Entity type)	ENSG00000100697 - dicer 1, ribonuclease III
	CDC34 Gene (Entity type)	ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme
	PCGF3 Gene (Entity type)	ENSG00000185619 - polycomb group ring finger 3
	PNPLA6 Gene (Entity type)	ENSG00000032444 - patatin like domain 6, lysophospholipase
	TSC2 Gene (Entity type)	ENSG00000103197 - TSC complex subunit 2

GALE

Gene (Entity type)

ENSG00000117308 - UDP-galactose-4-epimerase

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

ULK1

Gene (Entity type)

ENSG00000177169 - unc-51 like autophagy activating kinase 1

NFIC

Gene (Entity type)

ENSG00000141905 - nuclear factor I C

RARA

Gene (Entity type)

ENSG00000131759 - retinoic acid receptor alpha

DICER1

Gene (Entity type)

ENSG00000100697 - dicer 1, ribonuclease III

CDC34

Gene (Entity type)

ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme

PCGF3

Gene (Entity type)

ENSG00000185619 - polycomb group ring finger 3

PNPLA6

Gene (Entity type)

ENSG00000032444 - patatin like domain 6, lysophospholipase

TSC2

Gene (Entity type)

ENSG00000103197 - TSC complex subunit 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.