GSE168101 BRD4 knockout KBM-7 SLC Nucleoside Transport Proteins 1 v 3 human up (Gene Set)

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rummageo gene perturbations.gmt

Processed File (Entity type)

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LINCS

DCC (Entity type)

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Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_1_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_1_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_1_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_1_v_3_human_up.

Results found

Linked to

	Label	Description
	DDX52 Gene (Entity type)	DExD-box helicase 52
	MTCO2P12 Gene (Entity type)	MT-CO2 pseudogene 12
	MALAT1 Gene (Entity type)	metastasis associated lung adenocarcinoma transcript 1
	OLMALINC Gene (Entity type)	oligodendrocyte maturation-associated long intergenic non-coding RNA
	LUCAT1 Gene (Entity type)	lung cancer associated transcript 1
	HCG11 Gene (Entity type)	HLA complex group 11
	HERC2P9 Gene (Entity type)	HERC2 pseudogene 9
	HERC2P3 Gene (Entity type)	HERC2 pseudogene 3
	FTX Gene (Entity type)	FTX transcript, XIST regulator
	PARAIL Gene (Entity type)	palmitic acid regulated anti-inflammatory lncRNA

DDX52

Gene (Entity type)

DExD-box helicase 52

MTCO2P12

Gene (Entity type)

MT-CO2 pseudogene 12

MALAT1

Gene (Entity type)

metastasis associated lung adenocarcinoma transcript 1

OLMALINC

Gene (Entity type)

oligodendrocyte maturation-associated long intergenic non-coding RNA

LUCAT1

Gene (Entity type)

lung cancer associated transcript 1

HCG11

Gene (Entity type)

HLA complex group 11

HERC2P9

Gene (Entity type)

HERC2 pseudogene 9

HERC2P3

Gene (Entity type)

HERC2 pseudogene 3

FTX

Gene (Entity type)

FTX transcript, XIST regulator

PARAIL

Gene (Entity type)

palmitic acid regulated anti-inflammatory lncRNA

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.