GSE168101 BRD4 knockout KBM-7 SLC Nucleoside Transport Proteins 1 v 3 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

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Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_1_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_1_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_1_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_1_v_3_human_up.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	HDAC6 Gene (Entity type)	ENSG00000094631 - histone deacetylase 6
	TRIM24 Gene (Entity type)	ENSG00000122779 - tripartite motif containing 24
	PSMD4 Gene (Entity type)	ENSG00000159352 - proteasome 26S subunit ubiquitin receptor, non-ATPase 4
	VSIR Gene (Entity type)	ENSG00000107738 - V-set immunoregulatory receptor
	NET1 Gene (Entity type)	ENSG00000173848 - neuroepithelial cell transforming 1
	NFATC1 Gene (Entity type)	ENSG00000131196 - nuclear factor of activated T cells 1
	RPL5 Gene (Entity type)	ENSG00000122406 - ribosomal protein L5
	IGF2BP1 Gene (Entity type)	ENSG00000159217 - insulin like growth factor 2 mRNA binding protein 1
	DECR1 Gene (Entity type)	ENSG00000104325 - 2,4-dienoyl-CoA reductase 1

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

HDAC6

Gene (Entity type)

ENSG00000094631 - histone deacetylase 6

TRIM24

Gene (Entity type)

ENSG00000122779 - tripartite motif containing 24

PSMD4

Gene (Entity type)

ENSG00000159352 - proteasome 26S subunit ubiquitin receptor, non-ATPase 4

VSIR

Gene (Entity type)

ENSG00000107738 - V-set immunoregulatory receptor

NET1

Gene (Entity type)

ENSG00000173848 - neuroepithelial cell transforming 1

NFATC1

Gene (Entity type)

ENSG00000131196 - nuclear factor of activated T cells 1

RPL5

Gene (Entity type)

ENSG00000122406 - ribosomal protein L5

IGF2BP1

Gene (Entity type)

ENSG00000159217 - insulin like growth factor 2 mRNA binding protein 1

DECR1

Gene (Entity type)

ENSG00000104325 - 2,4-dienoyl-CoA reductase 1

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.