AK3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with AK3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with AK3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with AK3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with AK3 Up.

Results found

Linked to

	Label	Description
	MAPK9 Gene (Entity type)	ENSG00000050748 - mitogen-activated protein kinase 9
	CCNC Gene (Entity type)	ENSG00000112237 - cyclin C
	MIF Gene (Entity type)	ENSG00000240972 - macrophage migration inhibitory factor
	HIPK1 Gene (Entity type)	ENSG00000163349 - homeodomain interacting protein kinase 1
	IGSF1 Gene (Entity type)	ENSG00000147255 - immunoglobulin superfamily member 1
	TDP1 Gene (Entity type)	ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1
	SERPINA6 Gene (Entity type)	ENSG00000170099 - serpin family A member 6
	RAP1GDS1 Gene (Entity type)	ENSG00000138698 - Rap1 GTPase-GDP dissociation stimulator 1
	RAB11A Gene (Entity type)	ENSG00000103769 - RAB11A, member RAS oncogene family
	CRTC3 Gene (Entity type)	ENSG00000140577 - CREB regulated transcription coactivator 3

MAPK9

Gene (Entity type)

ENSG00000050748 - mitogen-activated protein kinase 9

CCNC

Gene (Entity type)

ENSG00000112237 - cyclin C

MIF

Gene (Entity type)

ENSG00000240972 - macrophage migration inhibitory factor

HIPK1

Gene (Entity type)

ENSG00000163349 - homeodomain interacting protein kinase 1

IGSF1

Gene (Entity type)

ENSG00000147255 - immunoglobulin superfamily member 1

TDP1

Gene (Entity type)

ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1

SERPINA6

Gene (Entity type)

ENSG00000170099 - serpin family A member 6

RAP1GDS1

Gene (Entity type)

ENSG00000138698 - Rap1 GTPase-GDP dissociation stimulator 1

RAB11A

Gene (Entity type)

ENSG00000103769 - RAB11A, member RAS oncogene family

CRTC3

Gene (Entity type)

ENSG00000140577 - CREB regulated transcription coactivator 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.