CCNH Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CCNH Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CCNH Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CCNH Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CCNH Down.

Results found

Linked to

	Label	Description
	PAFAH1B3 Gene (Entity type)	ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3
	NSA2 Gene (Entity type)	ENSG00000164346 - NSA2 ribosome biogenesis factor
	NXT1 Gene (Entity type)	ENSG00000132661 - nuclear transport factor 2 like export factor 1
	MRPS27 Gene (Entity type)	ENSG00000113048 - mitochondrial ribosomal protein S27
	SIVA1 Gene (Entity type)	ENSG00000184990 - SIVA1 apoptosis inducing factor
	CHD1 Gene (Entity type)	ENSG00000153922 - chromodomain helicase DNA binding protein 1
	CDC25C Gene (Entity type)	ENSG00000158402 - cell division cycle 25C
	HIGD2A Gene (Entity type)	ENSG00000146066 - HIG1 hypoxia inducible domain family member 2A
	SNRPA Gene (Entity type)	ENSG00000077312 - small nuclear ribonucleoprotein polypeptide A
	MIS18A Gene (Entity type)	ENSG00000159055 - MIS18 kinetochore protein A

PAFAH1B3

Gene (Entity type)

ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3

NSA2

Gene (Entity type)

ENSG00000164346 - NSA2 ribosome biogenesis factor

NXT1

Gene (Entity type)

ENSG00000132661 - nuclear transport factor 2 like export factor 1

MRPS27

Gene (Entity type)

ENSG00000113048 - mitochondrial ribosomal protein S27

SIVA1

Gene (Entity type)

ENSG00000184990 - SIVA1 apoptosis inducing factor

CHD1

Gene (Entity type)

ENSG00000153922 - chromodomain helicase DNA binding protein 1

CDC25C

Gene (Entity type)

ENSG00000158402 - cell division cycle 25C

HIGD2A

Gene (Entity type)

ENSG00000146066 - HIG1 hypoxia inducible domain family member 2A

SNRPA

Gene (Entity type)

ENSG00000077312 - small nuclear ribonucleoprotein polypeptide A

MIS18A

Gene (Entity type)

ENSG00000159055 - MIS18 kinetochore protein A

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.