PTGIS Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTGIS Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTGIS Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTGIS Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTGIS Up.

Results found

Linked to

	Label	Description
	HPN Gene (Entity type)	ENSG00000105707 - hepsin
	RAP1GDS1 Gene (Entity type)	ENSG00000138698 - Rap1 GTPase-GDP dissociation stimulator 1
	CLDN5 Gene (Entity type)	ENSG00000184113 - claudin 5
	SERPIND1 Gene (Entity type)	ENSG00000099937 - serpin family D member 1
	C4BPB Gene (Entity type)	ENSG00000123843 - complement component 4 binding protein beta
	AMBP Gene (Entity type)	ENSG00000106927 - alpha-1-microglobulin/bikunin precursor
	MMP13 Gene (Entity type)	ENSG00000137745 - matrix metallopeptidase 13
	DGCR2 Gene (Entity type)	ENSG00000070413 - DiGeorge syndrome critical region gene 2
	RAB6A Gene (Entity type)	ENSG00000175582 - RAB6A, member RAS oncogene family
	NAXD Gene (Entity type)	ENSG00000213995 - NAD(P)HX dehydratase

HPN

Gene (Entity type)

ENSG00000105707 - hepsin

RAP1GDS1

Gene (Entity type)

ENSG00000138698 - Rap1 GTPase-GDP dissociation stimulator 1

CLDN5

Gene (Entity type)

ENSG00000184113 - claudin 5

SERPIND1

Gene (Entity type)

ENSG00000099937 - serpin family D member 1

C4BPB

Gene (Entity type)

ENSG00000123843 - complement component 4 binding protein beta

AMBP

Gene (Entity type)

ENSG00000106927 - alpha-1-microglobulin/bikunin precursor

MMP13

Gene (Entity type)

ENSG00000137745 - matrix metallopeptidase 13

DGCR2

Gene (Entity type)

ENSG00000070413 - DiGeorge syndrome critical region gene 2

RAB6A

Gene (Entity type)

ENSG00000175582 - RAB6A, member RAS oncogene family

NAXD

Gene (Entity type)

ENSG00000213995 - NAD(P)HX dehydratase

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.