LAP3 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with LAP3 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with LAP3 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with LAP3 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with LAP3 Down.

Results found

Linked to

	Label	Description
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47
	CTR9 Gene (Entity type)	ENSG00000198730 - CTR9 component of Paf1/RNA polymerase II complex
	RETREG2 Gene (Entity type)	ENSG00000144567 - reticulophagy regulator family member 2
	SENP6 Gene (Entity type)	ENSG00000112701 - SUMO specific peptidase 6
	THOC2 Gene (Entity type)	ENSG00000125676 - THO complex subunit 2
	DHRS1 Gene (Entity type)	ENSG00000157379 - dehydrogenase/reductase 1
	PLAGL2 Gene (Entity type)	ENSG00000126003 - PLAG1 like zinc finger 2
	ADD1 Gene (Entity type)	ENSG00000087274 - adducin 1
	ESF1 Gene (Entity type)	ENSG00000089048 - ESF1 nucleolar pre-rRNA processing protein
	ATP7A Gene (Entity type)	ENSG00000165240 - ATPase copper transporting alpha

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

CTR9

Gene (Entity type)

ENSG00000198730 - CTR9 component of Paf1/RNA polymerase II complex

RETREG2

Gene (Entity type)

ENSG00000144567 - reticulophagy regulator family member 2

SENP6

Gene (Entity type)

ENSG00000112701 - SUMO specific peptidase 6

THOC2

Gene (Entity type)

ENSG00000125676 - THO complex subunit 2

DHRS1

Gene (Entity type)

ENSG00000157379 - dehydrogenase/reductase 1

PLAGL2

Gene (Entity type)

ENSG00000126003 - PLAG1 like zinc finger 2

ADD1

Gene (Entity type)

ENSG00000087274 - adducin 1

ESF1

Gene (Entity type)

ENSG00000089048 - ESF1 nucleolar pre-rRNA processing protein

ATP7A

Gene (Entity type)

ENSG00000165240 - ATPase copper transporting alpha

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.