BID Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with BID Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with BID Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with BID Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with BID Down.

Results found

Linked to

	Label	Description
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	PCGF3 Gene (Entity type)	ENSG00000185619 - polycomb group ring finger 3
	HERC2 Gene (Entity type)	ENSG00000128731 - HECT and RLD domain containing E3 ubiquitin protein ligase 2
	RNF38 Gene (Entity type)	ENSG00000137075 - ring finger protein 38
	GPAA1 Gene (Entity type)	ENSG00000197858 - glycosylphosphatidylinositol anchor attachment 1
	ZBED5 Gene (Entity type)	ENSG00000236287 - zinc finger BED-type containing 5
	EXOSC10 Gene (Entity type)	ENSG00000171824 - exosome component 10
	SNRNP40 Gene (Entity type)	ENSG00000060688 - small nuclear ribonucleoprotein U5 subunit 40
	GLT8D2 Gene (Entity type)	ENSG00000120820 - glycosyltransferase 8 domain containing 2
	THOC6 Gene (Entity type)	ENSG00000131652 - THO complex subunit 6

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

PCGF3

Gene (Entity type)

ENSG00000185619 - polycomb group ring finger 3

HERC2

Gene (Entity type)

ENSG00000128731 - HECT and RLD domain containing E3 ubiquitin protein ligase 2

RNF38

Gene (Entity type)

ENSG00000137075 - ring finger protein 38

GPAA1

Gene (Entity type)

ENSG00000197858 - glycosylphosphatidylinositol anchor attachment 1

ZBED5

Gene (Entity type)

ENSG00000236287 - zinc finger BED-type containing 5

EXOSC10

Gene (Entity type)

ENSG00000171824 - exosome component 10

SNRNP40

Gene (Entity type)

ENSG00000060688 - small nuclear ribonucleoprotein U5 subunit 40

GLT8D2

Gene (Entity type)

ENSG00000120820 - glycosyltransferase 8 domain containing 2

THOC6

Gene (Entity type)

ENSG00000131652 - THO complex subunit 6

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.