TP53I3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TP53I3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TP53I3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TP53I3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TP53I3 Up.

Results found

Linked to

	Label	Description
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	C2 Gene (Entity type)	ENSG00000166278 - complement C2
	PLXDC1 Gene (Entity type)	ENSG00000161381 - plexin domain containing 1
	MMP13 Gene (Entity type)	ENSG00000137745 - matrix metallopeptidase 13
	NDUFAF4 Gene (Entity type)	ENSG00000123545 - NADH:ubiquinone oxidoreductase complex assembly factor 4
	RPL10A Gene (Entity type)	ENSG00000198755 - ribosomal protein L10a
	RNF5 Gene (Entity type)	ENSG00000204308 - ring finger protein 5
	SV2B Gene (Entity type)	ENSG00000185518 - synaptic vesicle glycoprotein 2B
	METTL5 Gene (Entity type)	ENSG00000138382 - methyltransferase 5, N6-adenosine
	HSD17B8 Gene (Entity type)	ENSG00000204228 - hydroxysteroid 17-beta dehydrogenase 8

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

Gene (Entity type)

ENSG00000166278 - complement C2

PLXDC1

Gene (Entity type)

ENSG00000161381 - plexin domain containing 1

MMP13

Gene (Entity type)

ENSG00000137745 - matrix metallopeptidase 13

NDUFAF4

Gene (Entity type)

ENSG00000123545 - NADH:ubiquinone oxidoreductase complex assembly factor 4

RPL10A

Gene (Entity type)

ENSG00000198755 - ribosomal protein L10a

RNF5

Gene (Entity type)

ENSG00000204308 - ring finger protein 5

SV2B

Gene (Entity type)

ENSG00000185518 - synaptic vesicle glycoprotein 2B

METTL5

Gene (Entity type)

ENSG00000138382 - methyltransferase 5, N6-adenosine

HSD17B8

Gene (Entity type)

ENSG00000204228 - hydroxysteroid 17-beta dehydrogenase 8

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.