TSHR Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TSHR Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TSHR Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TSHR Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TSHR Up.

Results found

Linked to

	Label	Description
	PTPN12 Gene (Entity type)	ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12
	NRAS Gene (Entity type)	ENSG00000213281 - NRAS proto-oncogene, GTPase
	AGL Gene (Entity type)	ENSG00000162688 - amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase
	SMC3 Gene (Entity type)	ENSG00000108055 - structural maintenance of chromosomes 3
	CASD1 Gene (Entity type)	ENSG00000127995 - CAS1 domain sialic acid O acetyltransferase 1
	MSANTD2 Gene (Entity type)	ENSG00000120458 - Myb/SANT DNA binding domain containing 2
	KTN1 Gene (Entity type)	ENSG00000126777 - kinectin 1
	RAB23 Gene (Entity type)	ENSG00000112210 - RAB23, member RAS oncogene family
	SMCHD1 Gene (Entity type)	ENSG00000101596 - structural maintenance of chromosomes flexible hinge domain containing 1
	C4BPB Gene (Entity type)	ENSG00000123843 - complement component 4 binding protein beta

PTPN12

Gene (Entity type)

ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12

NRAS

Gene (Entity type)

ENSG00000213281 - NRAS proto-oncogene, GTPase

AGL

Gene (Entity type)

ENSG00000162688 - amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase

SMC3

Gene (Entity type)

ENSG00000108055 - structural maintenance of chromosomes 3

CASD1

Gene (Entity type)

ENSG00000127995 - CAS1 domain sialic acid O acetyltransferase 1

MSANTD2

Gene (Entity type)

ENSG00000120458 - Myb/SANT DNA binding domain containing 2

KTN1

Gene (Entity type)

ENSG00000126777 - kinectin 1

RAB23

Gene (Entity type)

ENSG00000112210 - RAB23, member RAS oncogene family

SMCHD1

Gene (Entity type)

ENSG00000101596 - structural maintenance of chromosomes flexible hinge domain containing 1

C4BPB

Gene (Entity type)

ENSG00000123843 - complement component 4 binding protein beta

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.