NME3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NME3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NME3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NME3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NME3 Up.

Results found

Linked to

	Label	Description
	NELL1 Gene (Entity type)	ENSG00000165973 - neural EGFL like 1
	TMED7 Gene (Entity type)	ENSG00000134970 - transmembrane p24 trafficking protein 7
	C4BPB Gene (Entity type)	ENSG00000123843 - complement component 4 binding protein beta
	GRSF1 Gene (Entity type)	ENSG00000132463 - G-rich RNA sequence binding factor 1
	PSMA2 Gene (Entity type)	ENSG00000106588 - proteasome 20S subunit alpha 2
	PRELID3B Gene (Entity type)	ENSG00000101166 - PRELI domain containing 3B
	MRPS14 Gene (Entity type)	ENSG00000120333 - mitochondrial ribosomal protein S14
	ANKMY2 Gene (Entity type)	ENSG00000106524 - ankyrin repeat and MYND domain containing 2
	SELENOF Gene (Entity type)	ENSG00000183291 - selenoprotein F
	TBCA Gene (Entity type)	ENSG00000171530 - tubulin folding cofactor A

NELL1

Gene (Entity type)

ENSG00000165973 - neural EGFL like 1

TMED7

Gene (Entity type)

ENSG00000134970 - transmembrane p24 trafficking protein 7

C4BPB

Gene (Entity type)

ENSG00000123843 - complement component 4 binding protein beta

GRSF1

Gene (Entity type)

ENSG00000132463 - G-rich RNA sequence binding factor 1

PSMA2

Gene (Entity type)

ENSG00000106588 - proteasome 20S subunit alpha 2

PRELID3B

Gene (Entity type)

ENSG00000101166 - PRELI domain containing 3B

MRPS14

Gene (Entity type)

ENSG00000120333 - mitochondrial ribosomal protein S14

ANKMY2

Gene (Entity type)

ENSG00000106524 - ankyrin repeat and MYND domain containing 2

SELENOF

Gene (Entity type)

ENSG00000183291 - selenoprotein F

TBCA

Gene (Entity type)

ENSG00000171530 - tubulin folding cofactor A

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.