SGPP2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SGPP2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SGPP2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SGPP2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SGPP2 Up.

Results found

Linked to

	Label	Description
	PPP2CB Gene (Entity type)	ENSG00000104695 - protein phosphatase 2 catalytic subunit beta
	RAB7A Gene (Entity type)	ENSG00000075785 - RAB7A, member RAS oncogene family
	PLXDC1 Gene (Entity type)	ENSG00000161381 - plexin domain containing 1
	CDC34 Gene (Entity type)	ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme
	SNX13 Gene (Entity type)	ENSG00000071189 - sorting nexin 13
	MAP7D1 Gene (Entity type)	ENSG00000116871 - MAP7 domain containing 1
	WAC Gene (Entity type)	ENSG00000095787 - WW domain containing adaptor with coiled-coil
	SS18 Gene (Entity type)	ENSG00000141380 - SS18 subunit of BAF chromatin remodeling complex
	OSBPL2 Gene (Entity type)	ENSG00000130703 - oxysterol binding protein like 2
	AFF4 Gene (Entity type)	ENSG00000072364 - ALF transcription elongation factor 4

PPP2CB

Gene (Entity type)

ENSG00000104695 - protein phosphatase 2 catalytic subunit beta

RAB7A

Gene (Entity type)

ENSG00000075785 - RAB7A, member RAS oncogene family

PLXDC1

Gene (Entity type)

ENSG00000161381 - plexin domain containing 1

CDC34

Gene (Entity type)

ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme

SNX13

Gene (Entity type)

ENSG00000071189 - sorting nexin 13

MAP7D1

Gene (Entity type)

ENSG00000116871 - MAP7 domain containing 1

WAC

Gene (Entity type)

ENSG00000095787 - WW domain containing adaptor with coiled-coil

SS18

Gene (Entity type)

ENSG00000141380 - SS18 subunit of BAF chromatin remodeling complex

OSBPL2

Gene (Entity type)

ENSG00000130703 - oxysterol binding protein like 2

AFF4

Gene (Entity type)

ENSG00000072364 - ALF transcription elongation factor 4

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.