USP4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with USP4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with USP4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with USP4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with USP4 Up.

Results found

Linked to

	Label	Description
	COX17 Gene (Entity type)	ENSG00000138495 - cytochrome c oxidase copper chaperone COX17
	COA4 Gene (Entity type)	ENSG00000181924 - cytochrome c oxidase assembly factor 4 homolog
	TPRKB Gene (Entity type)	ENSG00000144034 - TP53RK binding protein
	SSBP1 Gene (Entity type)	ENSG00000106028 - single stranded DNA binding protein 1
	MZT2A Gene (Entity type)	ENSG00000173272 - mitotic spindle organizing protein 2A
	NDUFB2 Gene (Entity type)	ENSG00000090266 - NADH:ubiquinone oxidoreductase subunit B2
	MRPL42 Gene (Entity type)	ENSG00000198015 - mitochondrial ribosomal protein L42
	MRPS33 Gene (Entity type)	ENSG00000090263 - mitochondrial ribosomal protein S33
	TBCA Gene (Entity type)	ENSG00000171530 - tubulin folding cofactor A
	DDT Gene (Entity type)	ENSG00000099977 - D-dopachrome tautomerase

COX17

Gene (Entity type)

ENSG00000138495 - cytochrome c oxidase copper chaperone COX17

COA4

Gene (Entity type)

ENSG00000181924 - cytochrome c oxidase assembly factor 4 homolog

TPRKB

Gene (Entity type)

ENSG00000144034 - TP53RK binding protein

SSBP1

Gene (Entity type)

ENSG00000106028 - single stranded DNA binding protein 1

MZT2A

Gene (Entity type)

ENSG00000173272 - mitotic spindle organizing protein 2A

NDUFB2

Gene (Entity type)

ENSG00000090266 - NADH:ubiquinone oxidoreductase subunit B2

MRPL42

Gene (Entity type)

ENSG00000198015 - mitochondrial ribosomal protein L42

MRPS33

Gene (Entity type)

ENSG00000090263 - mitochondrial ribosomal protein S33

TBCA

Gene (Entity type)

ENSG00000171530 - tubulin folding cofactor A

DDT

Gene (Entity type)

ENSG00000099977 - D-dopachrome tautomerase

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.