CHUK Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CHUK Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CHUK Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CHUK Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CHUK Up.

Results found

Linked to

	Label	Description
	PRB3 Gene (Entity type)	ENSG00000197870 - proline rich protein BstNI subfamily 3
	BTBD1 Gene (Entity type)	ENSG00000064726 - BTB domain containing 1
	LIMD2 Gene (Entity type)	ENSG00000136490 - LIM domain containing 2
	SV2B Gene (Entity type)	ENSG00000185518 - synaptic vesicle glycoprotein 2B
	IMPA1 Gene (Entity type)	ENSG00000133731 - inositol monophosphatase 1
	CD2AP Gene (Entity type)	ENSG00000198087 - CD2 associated protein
	SSB Gene (Entity type)	ENSG00000138385 - small RNA binding exonuclease protection factor La
	ACAN Gene (Entity type)	ENSG00000157766 - aggrecan
	SVEP1 Gene (Entity type)	ENSG00000165124 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
	MYOC Gene (Entity type)	ENSG00000034971 - myocilin

PRB3

Gene (Entity type)

ENSG00000197870 - proline rich protein BstNI subfamily 3

BTBD1

Gene (Entity type)

ENSG00000064726 - BTB domain containing 1

LIMD2

Gene (Entity type)

ENSG00000136490 - LIM domain containing 2

SV2B

Gene (Entity type)

ENSG00000185518 - synaptic vesicle glycoprotein 2B

IMPA1

Gene (Entity type)

ENSG00000133731 - inositol monophosphatase 1

CD2AP

Gene (Entity type)

ENSG00000198087 - CD2 associated protein

SSB

Gene (Entity type)

ENSG00000138385 - small RNA binding exonuclease protection factor La

ACAN

Gene (Entity type)

ENSG00000157766 - aggrecan

SVEP1

Gene (Entity type)

ENSG00000165124 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1

MYOC

Gene (Entity type)

ENSG00000034971 - myocilin

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.