GPC4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GPC4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GPC4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GPC4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GPC4 Up.

Results found

Linked to

	Label	Description
	PAFAH1B3 Gene (Entity type)	ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3
	POLD2 Gene (Entity type)	ENSG00000106628 - DNA polymerase delta 2, accessory subunit
	MACROD1 Gene (Entity type)	ENSG00000133315 - mono-ADP ribosylhydrolase 1
	SF3A2 Gene (Entity type)	ENSG00000104897 - splicing factor 3a subunit 2
	BCAT2 Gene (Entity type)	ENSG00000105552 - branched chain amino acid transaminase 2
	MSANTD2 Gene (Entity type)	ENSG00000120458 - Myb/SANT DNA binding domain containing 2
	UNC119B Gene (Entity type)	ENSG00000175970 - unc-119 lipid binding chaperone B
	ZDHHC4 Gene (Entity type)	ENSG00000136247 - zDHHC palmitoyltransferase 4
	TRAPPC4 Gene (Entity type)	ENSG00000196655 - trafficking protein particle complex subunit 4
	DTYMK Gene (Entity type)	ENSG00000168393 - deoxythymidylate kinase

PAFAH1B3

Gene (Entity type)

ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3

POLD2

Gene (Entity type)

ENSG00000106628 - DNA polymerase delta 2, accessory subunit

MACROD1

Gene (Entity type)

ENSG00000133315 - mono-ADP ribosylhydrolase 1

SF3A2

Gene (Entity type)

ENSG00000104897 - splicing factor 3a subunit 2

BCAT2

Gene (Entity type)

ENSG00000105552 - branched chain amino acid transaminase 2

MSANTD2

Gene (Entity type)

ENSG00000120458 - Myb/SANT DNA binding domain containing 2

UNC119B

Gene (Entity type)

ENSG00000175970 - unc-119 lipid binding chaperone B

ZDHHC4

Gene (Entity type)

ENSG00000136247 - zDHHC palmitoyltransferase 4

TRAPPC4

Gene (Entity type)

ENSG00000196655 - trafficking protein particle complex subunit 4

DTYMK

Gene (Entity type)

ENSG00000168393 - deoxythymidylate kinase

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.