GSE203329 HCC knockout 2 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE203329_HCC knockout_2_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE203329_HCC knockout_2_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE203329_HCC knockout_2_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE203329_HCC knockout_2_v_1_human_dn.

Results found

Linked to

	Label	Description
	HCP5 Gene (Entity type)	HLA complex P5
	SNHG4 Gene (Entity type)	small nucleolar RNA host gene 4
	NORAD Gene (Entity type)	non-coding RNA activated by DNA damage
	SBDSP1 Gene (Entity type)	SBDS pseudogene 1
	HMGB1P5 Gene (Entity type)	high mobility group box 1 pseudogene 5
	LINC03219 Gene (Entity type)	long intergenic non-protein coding RNA 3219
	DUS4L-BCAP29 Gene (Entity type)	DUS4L-BCAP29 readthrough
	MSANTD7 Gene (Entity type)	Myb/SANT DNA binding domain containing 7
	C22orf46P Gene (Entity type)	CTA-216E10.6
	HOTAIR Gene (Entity type)	HOX transcript antisense RNA

HCP5

Gene (Entity type)

HLA complex P5

SNHG4

Gene (Entity type)

small nucleolar RNA host gene 4

NORAD

Gene (Entity type)

non-coding RNA activated by DNA damage

SBDSP1

Gene (Entity type)

SBDS pseudogene 1

HMGB1P5

Gene (Entity type)

high mobility group box 1 pseudogene 5

LINC03219

Gene (Entity type)

long intergenic non-protein coding RNA 3219

DUS4L-BCAP29

Gene (Entity type)

DUS4L-BCAP29 readthrough

MSANTD7

Gene (Entity type)

Myb/SANT DNA binding domain containing 7

C22orf46P

Gene (Entity type)

CTA-216E10.6

HOTAIR

Gene (Entity type)

HOX transcript antisense RNA

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.