RIT2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RIT2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RIT2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RIT2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RIT2 Up.

Results found

Linked to

	Label	Description
	MRPS18B Gene (Entity type)	ENSG00000204568 - mitochondrial ribosomal protein S18B
	SH3GL3 Gene (Entity type)	ENSG00000140600 - SH3 domain containing GRB2 like 3, endophilin A3
	SERPINC1 Gene (Entity type)	ENSG00000117601 - serpin family C member 1
	RPS6KB1 Gene (Entity type)	ENSG00000108443 - ribosomal protein S6 kinase B1
	PIP5K1A Gene (Entity type)	ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha
	QRSL1 Gene (Entity type)	ENSG00000130348 - glutaminyl-tRNA amidotransferase subunit QRSL1
	TM9SF4 Gene (Entity type)	ENSG00000101337 - transmembrane 9 superfamily member 4
	RPL35 Gene (Entity type)	ENSG00000136942 - ribosomal protein L35
	PRR3 Gene (Entity type)	ENSG00000204576 - proline rich 3
	NDUFV2 Gene (Entity type)	ENSG00000178127 - NADH:ubiquinone oxidoreductase core subunit V2

MRPS18B

Gene (Entity type)

ENSG00000204568 - mitochondrial ribosomal protein S18B

SH3GL3

Gene (Entity type)

ENSG00000140600 - SH3 domain containing GRB2 like 3, endophilin A3

SERPINC1

Gene (Entity type)

ENSG00000117601 - serpin family C member 1

RPS6KB1

Gene (Entity type)

ENSG00000108443 - ribosomal protein S6 kinase B1

PIP5K1A

Gene (Entity type)

ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha

QRSL1

Gene (Entity type)

ENSG00000130348 - glutaminyl-tRNA amidotransferase subunit QRSL1

TM9SF4

Gene (Entity type)

ENSG00000101337 - transmembrane 9 superfamily member 4

RPL35

Gene (Entity type)

ENSG00000136942 - ribosomal protein L35

PRR3

Gene (Entity type)

ENSG00000204576 - proline rich 3

NDUFV2

Gene (Entity type)

ENSG00000178127 - NADH:ubiquinone oxidoreductase core subunit V2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.