RP2 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RP2 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RP2 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RP2 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RP2 Down.

Results found

Linked to

	Label	Description
	VAMP7 Gene (Entity type)	ENSG00000292366 - vesicle associated membrane protein 7
	HPGDS Gene (Entity type)	ENSG00000163106 - hematopoietic prostaglandin D synthase
	TMEM267 Gene (Entity type)	ENSG00000151881 - transmembrane protein 267
	MOCS2 Gene (Entity type)	ENSG00000164172 - molybdenum cofactor synthesis 2
	BBS4 Gene (Entity type)	ENSG00000140463 - Bardet-Biedl syndrome 4
	NUP43 Gene (Entity type)	ENSG00000120253 - nucleoporin 43
	EFHC2 Gene (Entity type)	ENSG00000183690 - EF-hand domain containing 2
	ANKMY2 Gene (Entity type)	ENSG00000106524 - ankyrin repeat and MYND domain containing 2
	SELENOF Gene (Entity type)	ENSG00000183291 - selenoprotein F
	SNX3 Gene (Entity type)	ENSG00000112335 - sorting nexin 3

VAMP7

Gene (Entity type)

ENSG00000292366 - vesicle associated membrane protein 7

HPGDS

Gene (Entity type)

ENSG00000163106 - hematopoietic prostaglandin D synthase

TMEM267

Gene (Entity type)

ENSG00000151881 - transmembrane protein 267

MOCS2

Gene (Entity type)

ENSG00000164172 - molybdenum cofactor synthesis 2

BBS4

Gene (Entity type)

ENSG00000140463 - Bardet-Biedl syndrome 4

NUP43

Gene (Entity type)

ENSG00000120253 - nucleoporin 43

EFHC2

Gene (Entity type)

ENSG00000183690 - EF-hand domain containing 2

ANKMY2

Gene (Entity type)

ENSG00000106524 - ankyrin repeat and MYND domain containing 2

SELENOF

Gene (Entity type)

ENSG00000183291 - selenoprotein F

SNX3

Gene (Entity type)

ENSG00000112335 - sorting nexin 3

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.