GSE210718 SHMT2 knockdown 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE210718_SHMT2 knockdown_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE210718_SHMT2 knockdown_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE210718_SHMT2 knockdown_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE210718_SHMT2 knockdown_1_v_0_human_up.

Results found

Linked to

	Label	Description
	THRA Gene (Entity type)	ENSG00000126351 - thyroid hormone receptor alpha
	NSF Gene (Entity type)	ENSG00000073969 - N-ethylmaleimide sensitive factor, vesicle fusing ATPase
	RAD54L Gene (Entity type)	ENSG00000085999 - RAD54 like
	KIF3C Gene (Entity type)	ENSG00000084731 - kinesin family member 3C
	ARHGAP44 Gene (Entity type)	ENSG00000006740 - Rho GTPase activating protein 44
	KIAA1217 Gene (Entity type)	ENSG00000120549 - KIAA1217
	TOR3A Gene (Entity type)	ENSG00000186283 - torsin family 3 member A
	CORO2B Gene (Entity type)	ENSG00000103647 - coronin 2B
	MPP2 Gene (Entity type)	ENSG00000108852 - MAGUK p55 scaffold protein 2
	TMCC3 Gene (Entity type)	ENSG00000057704 - transmembrane and coiled-coil domain family 3

THRA

Gene (Entity type)

ENSG00000126351 - thyroid hormone receptor alpha

NSF

Gene (Entity type)

ENSG00000073969 - N-ethylmaleimide sensitive factor, vesicle fusing ATPase

RAD54L

Gene (Entity type)

ENSG00000085999 - RAD54 like

KIF3C

Gene (Entity type)

ENSG00000084731 - kinesin family member 3C

ARHGAP44

Gene (Entity type)

ENSG00000006740 - Rho GTPase activating protein 44

KIAA1217

Gene (Entity type)

ENSG00000120549 - KIAA1217

TOR3A

Gene (Entity type)

ENSG00000186283 - torsin family 3 member A

CORO2B

Gene (Entity type)

ENSG00000103647 - coronin 2B

MPP2

Gene (Entity type)

ENSG00000108852 - MAGUK p55 scaffold protein 2

TMCC3

Gene (Entity type)

ENSG00000057704 - transmembrane and coiled-coil domain family 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.