GSE210718 SHMT2 knockdown 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE210718_SHMT2 knockdown_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE210718_SHMT2 knockdown_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE210718_SHMT2 knockdown_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE210718_SHMT2 knockdown_1_v_0_human_up.

Results found

Linked to

	Label	Description
	PRECSIT Gene (Entity type)	p53 regulated carcinoma associated Stat3 activating long intergenic non-protein coding transcript
	CENPBD1P Gene (Entity type)	CENPB DNA-binding domain containing 1, pseudogene
	LINC00857 Gene (Entity type)	long intergenic non-protein coding RNA 857
	NUTM2A-AS1 Gene (Entity type)	NUTM2A antisense RNA 1
	PDCD6IP-DT Gene (Entity type)	PDCD6IP divergent transcript
	JPX Gene (Entity type)	JPX transcript, XIST activator
	LINC00863 Gene (Entity type)	long intergenic non-protein coding RNA 863
	TTC28-AS1 Gene (Entity type)	TTC28 antisense RNA 1
	LINC01615 Gene (Entity type)	long intergenic non-protein coding RNA 1615
	FGF14-AS2 Gene (Entity type)	FGF14 antisense RNA 2

PRECSIT

Gene (Entity type)

p53 regulated carcinoma associated Stat3 activating long intergenic non-protein coding transcript

CENPBD1P

Gene (Entity type)

CENPB DNA-binding domain containing 1, pseudogene

LINC00857

Gene (Entity type)

long intergenic non-protein coding RNA 857

NUTM2A-AS1

Gene (Entity type)

NUTM2A antisense RNA 1

PDCD6IP-DT

Gene (Entity type)

PDCD6IP divergent transcript

JPX

Gene (Entity type)

JPX transcript, XIST activator

LINC00863

Gene (Entity type)

long intergenic non-protein coding RNA 863

TTC28-AS1

Gene (Entity type)

TTC28 antisense RNA 1

LINC01615

Gene (Entity type)

long intergenic non-protein coding RNA 1615

FGF14-AS2

Gene (Entity type)

FGF14 antisense RNA 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.