TRIM29 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TRIM29 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TRIM29 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TRIM29 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TRIM29 Up.

Results found

Linked to

	Label	Description
	KDM6B Gene (Entity type)	ENSG00000132510 - lysine demethylase 6B
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47
	RANGAP1 Gene (Entity type)	ENSG00000100401 - Ran GTPase activating protein 1
	USP25 Gene (Entity type)	ENSG00000155313 - ubiquitin specific peptidase 25
	TICAM1 Gene (Entity type)	ENSG00000127666 - TIR domain containing adaptor molecule 1
	ATF7IP Gene (Entity type)	ENSG00000171681 - activating transcription factor 7 interacting protein
	SENP6 Gene (Entity type)	ENSG00000112701 - SUMO specific peptidase 6
	ANKRD12 Gene (Entity type)	ENSG00000101745 - ankyrin repeat domain 12
	DGCR2 Gene (Entity type)	ENSG00000070413 - DiGeorge syndrome critical region gene 2
	MGRN1 Gene (Entity type)	ENSG00000102858 - mahogunin ring finger 1

KDM6B

Gene (Entity type)

ENSG00000132510 - lysine demethylase 6B

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

RANGAP1

Gene (Entity type)

ENSG00000100401 - Ran GTPase activating protein 1

USP25

Gene (Entity type)

ENSG00000155313 - ubiquitin specific peptidase 25

TICAM1

Gene (Entity type)

ENSG00000127666 - TIR domain containing adaptor molecule 1

ATF7IP

Gene (Entity type)

ENSG00000171681 - activating transcription factor 7 interacting protein

SENP6

Gene (Entity type)

ENSG00000112701 - SUMO specific peptidase 6

ANKRD12

Gene (Entity type)

ENSG00000101745 - ankyrin repeat domain 12

DGCR2

Gene (Entity type)

ENSG00000070413 - DiGeorge syndrome critical region gene 2

MGRN1

Gene (Entity type)

ENSG00000102858 - mahogunin ring finger 1

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.