GSE224004 GSE224005 CHD4 EWS-FLI1 knockdown 0 v 8 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_dn.

Results found

Linked to

	Label	Description
	SYNRG Gene (Entity type)	ENSG00000275066 - synergin gamma
	THAP9-AS1 Gene (Entity type)	ENSG00000251022 - THAP9 antisense RNA 1
	H3-3A Gene (Entity type)	ENSG00000163041 - H3.3 histone A
	CENPBD2P Gene (Entity type)	ENSG00000267858 - CENPB DNA-binding domains containing 2, pseudogene
	DUS4L-BCAP29 Gene (Entity type)	ENSG00000288558 - DUS4L-BCAP29 readthrough
	SNHG26 Gene (Entity type)	ENSG00000228649 - small nucleolar RNA host gene 26
	RPP21 Gene (Entity type)	ENSG00000241370 - ribonuclease P subunit p21
	KDM7A-DT Gene (Entity type)	ENSG00000260231 - KDM7A divergent transcript
	ZNF232-AS1 Gene (Entity type)	ENSG00000234327 - ZNF232 antisense RNA 1
	IQCH-AS1 Gene (Entity type)	ENSG00000259673 - IQCH antisense RNA 1

SYNRG

Gene (Entity type)

ENSG00000275066 - synergin gamma

THAP9-AS1

Gene (Entity type)

ENSG00000251022 - THAP9 antisense RNA 1

H3-3A

Gene (Entity type)

ENSG00000163041 - H3.3 histone A

CENPBD2P

Gene (Entity type)

ENSG00000267858 - CENPB DNA-binding domains containing 2, pseudogene

DUS4L-BCAP29

Gene (Entity type)

ENSG00000288558 - DUS4L-BCAP29 readthrough

SNHG26

Gene (Entity type)

ENSG00000228649 - small nucleolar RNA host gene 26

RPP21

Gene (Entity type)

ENSG00000241370 - ribonuclease P subunit p21

KDM7A-DT

Gene (Entity type)

ENSG00000260231 - KDM7A divergent transcript

ZNF232-AS1

Gene (Entity type)

ENSG00000234327 - ZNF232 antisense RNA 1

IQCH-AS1

Gene (Entity type)

ENSG00000259673 - IQCH antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.