GSE217776 GSE217829 MLL SGF29 CSNK2A1 knockout U-937 4 v 3 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_4_v_3_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_4_v_3_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_4_v_3_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE217776_GSE217829_MLL_SGF29_CSNK2A1 knockout_U-937_4_v_3_human_dn.

Results found

Linked to

	Label	Description
	VAMP7 Gene (Entity type)	ENSG00000292366 - vesicle associated membrane protein 7
	PKD1P1 Gene (Entity type)	ENSG00000244257 - polycystin 1, transient receptor potential channel interacting pseudogene 1
	NBPF8 Gene (Entity type)	ENSG00000270231 - NBPF member 8
	NORAD Gene (Entity type)	ENSG00000260032 - non-coding RNA activated by DNA damage
	OIP5-AS1 Gene (Entity type)	ENSG00000247556 - OIP5 antisense RNA 1
	ARPIN-AP3S2 Gene (Entity type)	ENSG00000250021 - ARPIN-AP3S2 readthrough
	MRPL45 Gene (Entity type)	ENSG00000278845 - mitochondrial ribosomal protein L45
	GTF2IP4 Gene (Entity type)	ENSG00000293241 - general transcription factor IIi pseudogene 4
	FGD5-AS1 Gene (Entity type)	ENSG00000225733 - FGD5 antisense RNA 1
	HERC2P2 Gene (Entity type)	ENSG00000291003 - HERC2 pseudogene 2

VAMP7

Gene (Entity type)

ENSG00000292366 - vesicle associated membrane protein 7

PKD1P1

Gene (Entity type)

ENSG00000244257 - polycystin 1, transient receptor potential channel interacting pseudogene 1

NBPF8

Gene (Entity type)

ENSG00000270231 - NBPF member 8

NORAD

Gene (Entity type)

ENSG00000260032 - non-coding RNA activated by DNA damage

OIP5-AS1

Gene (Entity type)

ENSG00000247556 - OIP5 antisense RNA 1

ARPIN-AP3S2

Gene (Entity type)

ENSG00000250021 - ARPIN-AP3S2 readthrough

MRPL45

Gene (Entity type)

ENSG00000278845 - mitochondrial ribosomal protein L45

GTF2IP4

Gene (Entity type)

ENSG00000293241 - general transcription factor IIi pseudogene 4

FGD5-AS1

Gene (Entity type)

ENSG00000225733 - FGD5 antisense RNA 1

HERC2P2

Gene (Entity type)

ENSG00000291003 - HERC2 pseudogene 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.