GSE145960 GSE145962 bms 3 v 1 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE145960_GSE145962_bms_3_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE145960_GSE145962_bms_3_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE145960_GSE145962_bms_3_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE145960_GSE145962_bms_3_v_1_human_dn.

Results found

Linked to

	Label	Description
	PTPN12 Gene (Entity type)	ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12
	BRAF Gene (Entity type)	ENSG00000157764 - B-Raf proto-oncogene, serine/threonine kinase
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	DTX3L Gene (Entity type)	ENSG00000163840 - deltex E3 ubiquitin ligase 3L
	ERN1 Gene (Entity type)	ENSG00000178607 - endoplasmic reticulum to nucleus signaling 1
	DYNLL2 Gene (Entity type)	ENSG00000264364 - dynein light chain LC8-type 2
	ULK1 Gene (Entity type)	ENSG00000177169 - unc-51 like autophagy activating kinase 1
	RAB7A Gene (Entity type)	ENSG00000075785 - RAB7A, member RAS oncogene family
	MANBA Gene (Entity type)	ENSG00000109323 - mannosidase beta

PTPN12

Gene (Entity type)

ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12

BRAF

Gene (Entity type)

ENSG00000157764 - B-Raf proto-oncogene, serine/threonine kinase

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

DTX3L

Gene (Entity type)

ENSG00000163840 - deltex E3 ubiquitin ligase 3L

ERN1

Gene (Entity type)

ENSG00000178607 - endoplasmic reticulum to nucleus signaling 1

DYNLL2

Gene (Entity type)

ENSG00000264364 - dynein light chain LC8-type 2

ULK1

Gene (Entity type)

ENSG00000177169 - unc-51 like autophagy activating kinase 1

RAB7A

Gene (Entity type)

ENSG00000075785 - RAB7A, member RAS oncogene family

MANBA

Gene (Entity type)

ENSG00000109323 - mannosidase beta

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.