ZBED2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ZBED2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ZBED2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ZBED2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ZBED2 Up.

Results found

Linked to

	Label	Description
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	COX7A2L Gene (Entity type)	ENSG00000115944 - cytochrome c oxidase subunit 7A2 like
	DUSP11 Gene (Entity type)	ENSG00000144048 - dual specificity phosphatase 11
	STAG3 Gene (Entity type)	ENSG00000066923 - STAG3 cohesin complex component
	KCMF1 Gene (Entity type)	ENSG00000176407 - potassium channel modulatory factor 1
	IFNAR1 Gene (Entity type)	ENSG00000142166 - interferon alpha and beta receptor subunit 1
	CD1B Gene (Entity type)	ENSG00000158485 - CD1b molecule
	CCNH Gene (Entity type)	ENSG00000134480 - cyclin H

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

COX7A2L

Gene (Entity type)

ENSG00000115944 - cytochrome c oxidase subunit 7A2 like

DUSP11

Gene (Entity type)

ENSG00000144048 - dual specificity phosphatase 11

STAG3

Gene (Entity type)

ENSG00000066923 - STAG3 cohesin complex component

KCMF1

Gene (Entity type)

ENSG00000176407 - potassium channel modulatory factor 1

IFNAR1

Gene (Entity type)

ENSG00000142166 - interferon alpha and beta receptor subunit 1

CD1B

Gene (Entity type)

ENSG00000158485 - CD1b molecule

CCNH

Gene (Entity type)

ENSG00000134480 - cyclin H

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.