CDK12 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CDK12 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CDK12 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CDK12 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CDK12 Up.

Results found

Linked to

	Label	Description
	TMEM140 Gene (Entity type)	ENSG00000146859 - transmembrane protein 140
	SERF2 Gene (Entity type)	ENSG00000140264 - small EDRK-rich factor 2
	EMC3 Gene (Entity type)	ENSG00000125037 - ER membrane protein complex subunit 3
	ATP5MF Gene (Entity type)	ENSG00000241468 - ATP synthase membrane subunit f
	NDEL1 Gene (Entity type)	ENSG00000166579 - nudE neurodevelopment protein 1 like 1
	ZNF394 Gene (Entity type)	ENSG00000160908 - zinc finger protein 394
	SLC9A1 Gene (Entity type)	ENSG00000090020 - solute carrier family 9 member A1
	NDUFB2 Gene (Entity type)	ENSG00000090266 - NADH:ubiquinone oxidoreductase subunit B2
	TFG Gene (Entity type)	ENSG00000114354 - trafficking from ER to golgi regulator
	ZNHIT1 Gene (Entity type)	ENSG00000106400 - zinc finger HIT-type containing 1

TMEM140

Gene (Entity type)

ENSG00000146859 - transmembrane protein 140

SERF2

Gene (Entity type)

ENSG00000140264 - small EDRK-rich factor 2

EMC3

Gene (Entity type)

ENSG00000125037 - ER membrane protein complex subunit 3

ATP5MF

Gene (Entity type)

ENSG00000241468 - ATP synthase membrane subunit f

NDEL1

Gene (Entity type)

ENSG00000166579 - nudE neurodevelopment protein 1 like 1

ZNF394

Gene (Entity type)

ENSG00000160908 - zinc finger protein 394

SLC9A1

Gene (Entity type)

ENSG00000090020 - solute carrier family 9 member A1

NDUFB2

Gene (Entity type)

ENSG00000090266 - NADH:ubiquinone oxidoreductase subunit B2

TFG

Gene (Entity type)

ENSG00000114354 - trafficking from ER to golgi regulator

ZNHIT1

Gene (Entity type)

ENSG00000106400 - zinc finger HIT-type containing 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.