GEM Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GEM Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GEM Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GEM Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GEM Down.

Results found

Linked to

	Label	Description
	MED1 Gene (Entity type)	ENSG00000125686 - mediator complex subunit 1
	TMEM43 Gene (Entity type)	ENSG00000170876 - transmembrane protein 43
	MSANTD2 Gene (Entity type)	ENSG00000120458 - Myb/SANT DNA binding domain containing 2
	TMCC1 Gene (Entity type)	ENSG00000172765 - transmembrane and coiled-coil domain family 1
	MTCL2 Gene (Entity type)	ENSG00000149639 - microtubule crosslinking factor 2
	DIP2A Gene (Entity type)	ENSG00000160305 - DIP2 acetate--CoA ligase A
	CTNND2 Gene (Entity type)	ENSG00000169862 - catenin delta 2
	KMT2A Gene (Entity type)	ENSG00000118058 - lysine methyltransferase 2A
	TGM1 Gene (Entity type)	ENSG00000092295 - transglutaminase 1
	DPAGT1 Gene (Entity type)	ENSG00000172269 - dolichyl-phosphate N-acetylglucosaminephosphotransferase 1

MED1

Gene (Entity type)

ENSG00000125686 - mediator complex subunit 1

TMEM43

Gene (Entity type)

ENSG00000170876 - transmembrane protein 43

MSANTD2

Gene (Entity type)

ENSG00000120458 - Myb/SANT DNA binding domain containing 2

TMCC1

Gene (Entity type)

ENSG00000172765 - transmembrane and coiled-coil domain family 1

MTCL2

Gene (Entity type)

ENSG00000149639 - microtubule crosslinking factor 2

DIP2A

Gene (Entity type)

ENSG00000160305 - DIP2 acetate--CoA ligase A

CTNND2

Gene (Entity type)

ENSG00000169862 - catenin delta 2

KMT2A

Gene (Entity type)

ENSG00000118058 - lysine methyltransferase 2A

TGM1

Gene (Entity type)

ENSG00000092295 - transglutaminase 1

DPAGT1

Gene (Entity type)

ENSG00000172269 - dolichyl-phosphate N-acetylglucosaminephosphotransferase 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.