GEM Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GEM Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GEM Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GEM Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GEM Down.

Results found

Linked to

	Label	Description
	CTNND2 Gene (Entity type)	ENSG00000169862 - catenin delta 2
	ZNF611 Gene (Entity type)	ENSG00000213020 - zinc finger protein 611
	ARFGEF2 Gene (Entity type)	ENSG00000124198 - ARF guanine nucleotide exchange factor 2
	SLC17A7 Gene (Entity type)	ENSG00000104888 - solute carrier family 17 member 7
	NKTR Gene (Entity type)	ENSG00000114857 - natural killer cell triggering receptor
	KMT2A Gene (Entity type)	ENSG00000118058 - lysine methyltransferase 2A
	CKMT2 Gene (Entity type)	ENSG00000131730 - creatine kinase, mitochondrial 2
	DPAGT1 Gene (Entity type)	ENSG00000172269 - dolichyl-phosphate N-acetylglucosaminephosphotransferase 1
	TGM1 Gene (Entity type)	ENSG00000092295 - transglutaminase 1
	MTCL2 Gene (Entity type)	ENSG00000149639 - microtubule crosslinking factor 2

CTNND2

Gene (Entity type)

ENSG00000169862 - catenin delta 2

ZNF611

Gene (Entity type)

ENSG00000213020 - zinc finger protein 611

ARFGEF2

Gene (Entity type)

ENSG00000124198 - ARF guanine nucleotide exchange factor 2

SLC17A7

Gene (Entity type)

ENSG00000104888 - solute carrier family 17 member 7

NKTR

Gene (Entity type)

ENSG00000114857 - natural killer cell triggering receptor

KMT2A

Gene (Entity type)

ENSG00000118058 - lysine methyltransferase 2A

CKMT2

Gene (Entity type)

ENSG00000131730 - creatine kinase, mitochondrial 2

DPAGT1

Gene (Entity type)

ENSG00000172269 - dolichyl-phosphate N-acetylglucosaminephosphotransferase 1

TGM1

Gene (Entity type)

ENSG00000092295 - transglutaminase 1

MTCL2

Gene (Entity type)

ENSG00000149639 - microtubule crosslinking factor 2

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.