GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 6 v 4 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_4_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_4_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_4_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_6_v_4_human_dn.

Results found

Linked to

	Label	Description
	BMPR1A Gene (Entity type)	ENSG00000107779 - bone morphogenetic protein receptor type 1A
	PAFAH1B3 Gene (Entity type)	ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3
	SIK3 Gene (Entity type)	ENSG00000160584 - SIK family kinase 3
	TRIM9 Gene (Entity type)	ENSG00000100505 - tripartite motif containing 9
	SLC6A9 Gene (Entity type)	ENSG00000196517 - solute carrier family 6 member 9
	ARHGAP44 Gene (Entity type)	ENSG00000006740 - Rho GTPase activating protein 44
	TUBB4A Gene (Entity type)	ENSG00000104833 - tubulin beta 4A class IVa
	MYBPC2 Gene (Entity type)	ENSG00000086967 - myosin binding protein C2
	PTBP2 Gene (Entity type)	ENSG00000117569 - polypyrimidine tract binding protein 2
	DOK4 Gene (Entity type)	ENSG00000125170 - docking protein 4

BMPR1A

Gene (Entity type)

ENSG00000107779 - bone morphogenetic protein receptor type 1A

PAFAH1B3

Gene (Entity type)

ENSG00000079462 - platelet activating factor acetylhydrolase 1b catalytic subunit 3

SIK3

Gene (Entity type)

ENSG00000160584 - SIK family kinase 3

TRIM9

Gene (Entity type)

ENSG00000100505 - tripartite motif containing 9

SLC6A9

Gene (Entity type)

ENSG00000196517 - solute carrier family 6 member 9

ARHGAP44

Gene (Entity type)

ENSG00000006740 - Rho GTPase activating protein 44

TUBB4A

Gene (Entity type)

ENSG00000104833 - tubulin beta 4A class IVa

MYBPC2

Gene (Entity type)

ENSG00000086967 - myosin binding protein C2

PTBP2

Gene (Entity type)

ENSG00000117569 - polypyrimidine tract binding protein 2

DOK4

Gene (Entity type)

ENSG00000125170 - docking protein 4

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.