GSE97616 GSE97617 NOK overexpression HEK RNA Small Interfering 2 v 4 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE97616_GSE97617_NOK overexpression_HEK_RNA Small Interfering_2_v_4_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE97616_GSE97617_NOK overexpression_HEK_RNA Small Interfering_2_v_4_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE97616_GSE97617_NOK overexpression_HEK_RNA Small Interfering_2_v_4_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE97616_GSE97617_NOK overexpression_HEK_RNA Small Interfering_2_v_4_human_dn.

Results found

Linked to

	Label	Description
	SNHG1 Gene (Entity type)	small nucleolar RNA host gene 1
	SNHG3 Gene (Entity type)	small nucleolar RNA host gene 3
	TRIM16L Gene (Entity type)	tripartite motif containing 16 like (pseudogene)
	POLR2J3 Gene (Entity type)	RNA polymerase II subunit J3
	LOC389906 Gene (Entity type)	zinc finger protein 839 pseudogene
	CRNDE Gene (Entity type)	colorectal neoplasia differentially expressed
	LINC03219 Gene (Entity type)	long intergenic non-protein coding RNA 3219
	MIR34AHG Gene (Entity type)	MIR34A host gene
	TMEM147-AS1 Gene (Entity type)	TMEM147 antisense RNA 1
	LINC00958 Gene (Entity type)	long intergenic non-protein coding RNA 958

SNHG1

Gene (Entity type)

small nucleolar RNA host gene 1

SNHG3

Gene (Entity type)

small nucleolar RNA host gene 3

TRIM16L

Gene (Entity type)

tripartite motif containing 16 like (pseudogene)

POLR2J3

Gene (Entity type)

RNA polymerase II subunit J3

LOC389906

Gene (Entity type)

zinc finger protein 839 pseudogene

CRNDE

Gene (Entity type)

colorectal neoplasia differentially expressed

LINC03219

Gene (Entity type)

long intergenic non-protein coding RNA 3219

MIR34AHG

Gene (Entity type)

MIR34A host gene

TMEM147-AS1

Gene (Entity type)

TMEM147 antisense RNA 1

LINC00958

Gene (Entity type)

long intergenic non-protein coding RNA 958

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.